Yearly RecordS = Statistics D = Draft Picks R = Rosters O = Organizational Rosters Box = Boxscores
| 2009 | MWC | - | S - R | 15 | 9 | 41-23 | .625 | 2.0 | 4 | Tony Gwynn | Conference Finalists,CWS Regionals | | 2008 | MWC | - | S - R | 16 | 8 | 31-28 | .667 | 3.0 | 3 | Tony Gwynn | dnq | | 2007 | MWC | - | S - R | 12 | 12 | 29-30 | .500 | 8.5 | 3 | Tony Gwynn | dnq | | 2006 | MWC | - | S - R | 14 | 8 | 23-36 | .636 | 3.0 | 3 | Tony Gwynn | dnq | | 2005 | MWC | - | S - R | 17 | 13 | 26-35 | .567 | 6.0 | 3 | Tony Gwynn | dnq | | 2004 | MWC | - | S - R | 19 | 9 | 35-29 | .679 | - | 1 | Tony Gwynn | Conf. Finalists | | 2003 | MWC | - | S - R | 18 | 12 | 29-32 | .600 | 6.0 | 3 | Tony Gwynn | Conf. Finalists | | 2002 | MWC | - | S - R | 20 | 10 | 43-23 | .667 | - | 1 | Jim Dietz | Conf. Finalists |
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