| 11 | Andrew Barbaro | C | Ind | 6-3 | 210 | Right | Right | 5/4/1984 | 24 | Brooklyn,New York | | UDFA | | |
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| 9 | Alex Bardeguez | IF-OF | Ind | 6-1 | 190 | Both | Right | 4/5/1985 | 23 | Coram,New York | | UDFA | | |
| 20 | Lenny Bays | P | RK | 5-11 | 180 | Right | Right | 12/15/1979 | 28 | Fort Thomas,Kentucky | 2002 | 48 | 1413 | KC |
| 4 | Kennard Bibbs | OF | AAA | 5-9 | 160 | Left | Left | 3/5/1980 | 28 | Houston,Texas | 2002 | 14 | 409 | MIL |
| 14 | Kelly Casares | P | Ind | 6-5 | 185 | Right | Right | 10/7/1983 | 24 | Missouri City,Texas | | UDFA | | |
| 21 | Kevin Cheppenko | P | Ind | 6-8 | 225 | Left | Right | 10/25/1979 | 28 | Thunder Bay,Ontario | | UDFA | | |
| 16 | Ryan Ford | P | A+ | 6-3 | 180 | Left | Left | 7/10/1982 | 25 | Rochester,Michigan | 2004 | 15 | 457 | OAK |
| 26 | Javier Garcia | P | A | 6-5 | 175 | Right | Right | 1/5/1984 | 24 | San Casimiro,Venezuela | 2000 | UDFA | | LAD |
| 6 | Ryan Grant | P | Ind | 6-1 | 190 | Right | Right | 7/12/1985 | 22 | Center Point,Iowa | | UDFA | | |
| 5 | Tim Hutting | SS | AAA | 6-0 | 190 | Right | Right | 10/29/1981 | 26 | Valencia,California | 2003 | 8 | 243 | SF |
| 35 | Travis Kane | P | Ind | 6-2 | 200 | Left | Right | 4/3/1984 | 24 | East Wenatchee,Washington | | UDFA | | |
| 25 | Josh Kite | P | AA | 6-2 | 190 | Left | Left | 3/2/1982 | 26 | Greeneville,Tennessee | 2004 | UDFA | | CLE |
| 28 | Pat Mahomes | P | MLB | 6-4 | 212 | Right | Right | 8/9/1970 | 37 | Bryan,Texas | 1988 | 6 | 155 | MIN |
| 12 | Ben Moore | P | AA | 6-1 | 170 | Right | Right | 6/10/1981 | 27 | St. Croix Falls,Wisconsin | 2003 | UDFA | | NYY |
| 23 | Angelo Morales | P | A | 6-1 | 170 | Right | Right | 5/2/1986 | 22 | David,Panama | 2002 | UDFA | | KC |
| 27 | Josh Patton | 3B | Ind | 5-10 | 178 | Left | Right | 5/21/1975 | 33 | Connerville,Indiana | | UDFA | | |
| 29 | Kris Regas | P | AAA | 6-4 | 210 | Both | Left | 11/15/1979 | 28 | Bourbonnais,Illinois | 2004 | UDFA | | NYM |
| 10 | Pat Reilly | DH | A+ | 6-1 | 205 | Left | Left | 12/2/1981 | 26 | Costa Mesa,California | 2005 | UDFA | | LAA |
| 25 | Jarrett Reininger | 3B | A | 5-10 | 190 | Right | Right | 12/3/1982 | 25 | San Antonio,Texas | 2004 | 15 | 438 | CIN |
| 15 | Grant Richardson | 1B | A | 6-1 | 210 | Right | Right | 2/26/1983 | 25 | Edmonds,Washington | 2004 | 14 | 406 | MIL |
| - | Mark Roberts | P | AA | 5-11 | 185 | Right | Right | 6/24/1982 | 26 | Santa Ana,California | 2004 | 8 | 231 | TEX |
| 18 | Will Smith | OF | AAA | 6-1 | 185 | Left | Right | 10/23/1981 | 26 | Alexandria,Louisiana | 2000 | 6 | 161 | FLA |
| 39 | Paul Smyth | OF | A | 6-2 | 205 | Right | Right | 4/25/1983 | 25 | Brawley,California | 2006 | 23 | 703 | BOS |
| 11 | Beau Torbert | OF | AAA | 6-4 | 245 | Right | Right | 5/1/1983 | 25 | Phenix City,Alabama | 2004 | 17 | 514 | HOU |
| 17 | Ben Van Iderstine | OF | AA | 6-2 | 200 | Left | Left | 1/20/1978 | 30 | Regina,Saskatchewan | 2004 | UDFA | | MIL |
| - | Kyle Zweber | P | Ind | 6-0 | 190 | Right | Right | 12/9/1985 | 22 | Lakeville,Minnesota | | UDFA | | |