| East | W | L | Pct | GB |
| NY Yankees | 101 | 61 | .623 | -- |
| Boston | 98 | 64 | .605 | 3.0 |
| Baltimore | 78 | 84 | .481 | 23.0 |
| Tampa Bay | 70 | 91 | .435 | 30.5 |
| Toronto | 67 | 94 | .416 | 33.5 |
| Phase | Rnd | Ovl | Player | Pos | Current Status |
| June-Reg | 1 | 8 | Wade Townsend | P | Inactive |
| June-Reg | 3 | 79 | Jeff Fiorentino | C | Free Agent |
| June-Reg | 4 | 109 | Brad Bergesen | P | Intl |
| June-Reg | 5 | 139 | C.J. Smith | OF | Retired |
| June-Reg | 6 | 169 | Bryce Chamberlin | P | Retired |
| June-Reg | 7 | 199 | Seth Johnston | 2B | Retired |
| June-Reg | 8 | 229 | David Haehnel | P | Retired |
| June-Reg | 9 | 259 | Joey Howell | OF | Retired |
| June-Reg | 10 | 289 | Drew Moffitt | OF | Retired |
| June-Reg | 11 | 319 | Kevin Hart | P | Inactive |
| June-Reg | 12 | 349 | Dan Puente | C | Retired |
| June-Reg | 13 | 379 | Denver Kitch | SS | Retired |
| June-Reg | 14 | 409 | Kyle Schmidt | P | Retired |
| June-Reg | 15 | 439 | Will Venable | OF | SD 40m |
| June-Reg | 16 | 469 | Andy Schindling | P | Retired |
| June-Reg | 17 | 499 | Kyle Boehm | P | Retired |
| June-Reg | 18 | 529 | Trent Baysinger | P | Retired |
| June-Reg | 19 | 559 | Matt McGuirk | OF | Retired |
| June-Reg | 20 | 589 | Jonathan Tucker | 2B | WAN Minors [AA] |
| June-Reg | 21 | 619 | Ryan Finan | 1B | Retired |
| June-Reg | 22 | 649 | Rob Marconi | 3B | Retired |
| June-Reg | 23 | 679 | Ryan Schwabe | P | Retired |
| June-Reg | 24 | 709 | Dale Mollenhauer | SS | Inactive |
| June-Reg | 25 | 739 | Zach Minor | P | Retired |
| June-Reg | 26 | 769 | Kevin Kotch | C | Retired |
| June-Reg | 27 | 799 | Cody Wargo | C | Retired |
| June-Reg | 28 | 829 | Alex Graham | P | Retired |
| June-Reg | 29 | 859 | Marc Young | P | Inactive |
| June-Reg | 30 | 889 | Jaime Garcia | P | STL Minors (DL-15) 40m |
| June-Reg | 31 | 919 | Matthew Garnett | P | Inactive |
| June-Reg | 32 | 949 | Ray Jeffords | P | Inactive |
| June-Reg | 33 | 979 | Jared Elmore | P | Inactive |
| June-Reg | 34 | 1009 | Nick Burns | C | Inactive |
| June-Reg | 35 | 1039 | Drew Crisp | SS | Inactive |
| June-Reg | 36 | 1069 | Derik Drewett | P | Retired |
| June-Reg | 37 | 1099 | Ian Harrington | P | Retired |
| June-Reg | 38 | 1129 | Adam Crisp | OF | Retired |
| June-Reg | 39 | 1159 | Larry Hill | P | Inactive |
| June-Reg | 40 | 1189 | Jason Roach | P | Retired |
| June-Reg | 41 | 1219 | Demetrios Marinos | C | Inactive |
| June-Reg | 42 | 1248 | Brian Blackburn | C | Retired |
| June-Reg | 43 | 1277 | Bryan Casey | C | Retired |
| June-Reg | 44 | 1306 | Leonardo Calderon | P | Retired |
| June-Reg | 45 | 1335 | Samuel Basta | P | Retired |
| June-Reg | 46 | 1364 | Casey Larson | OF | Retired |
| June-Reg | 47 | 1393 | Bailey Daniels | P | Retired |
| June-Reg | 48 | 1422 | Matt Lane | P | Retired |
| June-Reg | 49 | 1450 | Clifton Turner | OF | Inactive |
| June-Reg | 50 | 1478 | Michael Banks | P | Inactive |