| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Florida Atlantic | Owls | 21 | 9 | .700 | -- | 37-24 | 420 | 373 | John McCormack | FAU Baseball Stadium | Dan Scheffler (1) | Mike Gipson (3) | CWS Regionals |
| 2 | Louisiana-Lafayette | Ragin Cajuns | 21 | 9 | .700 | -- | 38-22 | 381 | 263 | Tony Robichaux | M.L. "Tigue" Moore Field | Jordan Poirrier (9) | Zach Osborne (1) | CWS Regionals |
| 3 | Middle Tenn State | Blue Raiders | 18 | 12 | .600 | 3.0 | 35-23 | 457 | 385 | Steve Peterson | Reese Smith Field | Blake McDade (3) | Chad Edwards (9) | |
| 4 | Florida Intl ** | Golden Panthers | 17 | 13 | .567 | 4.0 | 36-25 | 483 | 420 | Turtle Thomas | University Park Stadium | Mike Martinez (7) | Scott Rembisz (17) | Conference Champions,CWS Regionals |
| 5 | South Alabama | Jaguars | 17 | 13 | .567 | 4.0 | 32-27 | 443 | 423 | Steve Kittrell | Eddie Stanky Field | Jake Overstreet (29) | Derek Hanks (4) | |
| 6 | Troy | Trojans | 16 | 14 | .533 | 5.0 | 36-25 | 521 | 394 | Bobby Pierce | Riddle-Pace Field | Adam Bryant (2) | Andrew Dickinson (5) | Conference Finalists |
| 7 | Arkansas State | Red Wolves | 16 | 14 | .533 | 5.0 | 30-28 | 377 | 353 | Tommy Raffo | Tomlinson Stadium at Kell | Murray Watts (8) | Jacob Lee (8) | |
| 8 | Western Kentucky | Hilltoppers | 16 | 14 | .533 | 5.0 | 35-23 | 456 | 298 | Chris Finwood | Nick Denes Field | Matt Rice (12) | Matt Ridings (2) | |
| 9 | Ark-Little Rock | Trojans | 12 | 16 | .429 | 8.0 | 29-25 | 398 | 366 | Scott Norwood | Gary Hogan Field | Tyson Parks (28) | Adam Champion (10) | |
| 10 | Louisiana-Monroe | Warhawks | 7 | 23 | .233 | 14.0 | 17-38 | 317 | 480 | Jeff Schexnaider | Warhawk Field | Nick Wade (34) | Drew Granier (13) | |
| 11 | New Orleans | Privateers | 2 | 26 | .071 | 18.0 | 13-39 | 287 | 481 | Bruce Peddie | Maestri Field | Nick Schwaner (18) | Mats Mattson (25) |