| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Rice | Owls | 17 | 7 | .708 | -- | 40-23 | 512 | 312 | Wayne Graham | Reckling Park | Anthony Rendon (1) | Jared Rogers (3) | Conference Finalist,CWS Regionals |
| 2 | Southern Miss ** | Golden Eagles | 14 | 10 | .583 | 3.0 | 36-24 | 516 | 388 | Scott Berry | Pete Taylor Park | B.A. Vollmuth (2) | Scott Copeland (1) | Conference Champion,CWS Regionals |
| 3 | Memphis | Tigers | 12 | 12 | .500 | 5.0 | 28-30 | 414 | 429 | Daron Schoenrock | FedEx Park | Chad Zurcher (9) | Ryan Fraser (10) | |
| 4 | Marshall | Thundering Herd | 12 | 12 | .500 | 5.0 | 27-31 | 340 | 428 | Jeff Waggoner | Appalachian Power Park | Victor Gomez (12) | Mike Mason (20) | |
| 5 | East Carolina | Pirates | 11 | 13 | .458 | 6.0 | 32-27 | 422 | 371 | Billy Godwin | Clark-LeClair Stadium | Kyle Roller (7) | Seth Maness (2) | |
| 6 | Houston | Cougars | 11 | 13 | .458 | 6.0 | 25-32 | 372 | 420 | Todd Whitting | Cougar Field | Blake Kelso (20) | Michael Goodnight (11) | |
| 7 | Alabama-Birmingham | Blazers | 11 | 13 | .458 | 6.0 | 28-25 | 371 | 361 | Brian Shoop | Jerry D. Young Memorial F | Luke Stewart (23) | Mitch Kloskowski (19) | |
| 8 | Central Florida | Knights | 10 | 14 | .417 | 7.0 | 33-22 | 459 | 379 | Terry Rooney | Jay Bergman Field | Chris Duffy (3) | Joe Rogers (29) | |
| 9 | Tulane | Green Wave | 10 | 14 | .417 | 7.0 | 32-24 | 368 | 352 | Rick Jones | Greer Field at Turchin St | Rob Segedin (5) | Nick Pepitone (4) |