| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Elon | Phoenix | 23 | 4 | .852 | -- | 41-18 | 604 | 417 | Mike Kennedy | Latham Park | Pat Irvine (2) | Jimmy Reyes (5) | Conference Finalists,CWS Regionals,#24 in Nation |
| 2 | Georgia Southern ** | Eagles | 20 | 8 | .714 | 3.5 | 42-17 | 561 | 344 | Rodney Hennon | J.I. Clements Stadium | Griffin Benedict (5) | Christopher Mederos (1) | Conference Champions,CWS Regionals |
| 3 | The Citadel | Bulldogs | 20 | 10 | .667 | 4.5 | 37-22 | 452 | 318 | Fred Jordan | Joseph P. Riley, Jr. Park | Richard Jones (7) | Wes Wrenn (3) | |
| 4 | Western Carolina | Catamounts | 19 | 10 | .655 | 5.0 | 35-22 | 482 | 414 | Bobby Maranda | Hennon Stadium | Brent Greer (15) | Chris Masters (7) | |
| 5 | College of Charleston | Cougars | 17 | 13 | .567 | 7.5 | 35-22 | 554 | 422 | -- | Patriots Point | Joey Bergman (1) | Jesse Simpson (9) | |
| 6 | Appalachian State | Mountaineers | 15 | 13 | .536 | 8.5 | 33-21 | 421 | 331 | Chris Pollard | Beaver Field at Jim and B | Isaac Harrow (3) | Zach Quate (2) | |
| 7 | Davidson College | Wildcats | 11 | 16 | .407 | 12.0 | 18-31 | 313 | 403 | Richard Cooke | Wilson Field | Pat Brady (34) | Mike Frongello (31) | |
| 8 | Furman | Paladins | 10 | 20 | .333 | 14.5 | 24-31 | 310 | 450 | Ronald Smith | Latham Baseball Stadium | Justin Holloway (45) | Ian Parry (10) | |
| 9 | Samford | Bulldogs | 9 | 21 | .300 | 15.5 | 17-35 | 320 | 467 | Casey Dunn | Joe Lee Griffin Stadium | Brad Moss (57) | Michael Jarry (21) | |
| 10 | UNC-Greensboro | Spartans | 7 | 21 | .250 | 16.5 | 20-29 | 284 | 376 | Mike Gaski | UNCG Baseball Stadium | Pedro Leon (30) | Rob Gilliam (12) | |
| 11 | Wofford College | Terriers | 7 | 22 | .241 | 17.0 | 17-32 | 331 | 480 | Todd Interdonato | Russell C. King Field | James Foster (32) | Michael Gilmartin (18) |