| Eastern | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Jackson State | Tigers | 18 | 5 | .783 | -- | 37-22 | 490 | 434 | Omar Johnson | JSU Baseball Complex | Laderek Camper (2) | Charles Williams (2) | |
| 2 | Alcorn State | Braves | 15 | 9 | .625 | 3.5 | 29-16 | 391 | 348 | Willie McGowan | ASU Baseball Park | Jabari Graham (8) | Lee Johnson (4) | |
| 3 | Miss. Valley St | Delta Devils | 13 | 10 | .565 | 5.0 | 18-26 | 170 | 236 | Doug Shanks | Jeff Squier (70) | Chris Mills (11) | ||
| 4 | Alabama State | Hornets | 8 | 14 | .364 | 9.5 | 13-22 | 199 | 265 | Larry Watkins | Paterson Field | Darrion Pedro (28) | Zeb Hilburn (14) | |
| 5 | Alabama A&M | Bulldogs | 4 | 20 | .167 | 14.5 | 7-39 | 154 | 388 | Jay Martin | Bulldog Field | Tyron Childress (26) | Kevin Collins (19) | |
| Western | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Southern | Jaguars | 18 | 6 | .750 | -- | 28-18 | 405 | 305 | Roger Cador | Lee-Hines Field | Brad McDavid (11) | Sherrard Brooks (8) | |
| 2 | Grambling State | Tigers | 15 | 9 | .625 | 3.0 | 21-28 | 359 | 409 | Barret Rey | Brent Smith (13) | Matthew Jefferson (1) | ||
| 3 | Prairie View A&M | Panthers | 14 | 10 | .583 | 4.0 | 25-26 | 393 | 464 | Waskyla Cullivan | Panther Field | Myrio Richard (1) | Wrandal Taylor (3) | Conf Finalists |
| 4 | Texas Southern ** | Tigers | 7 | 17 | .292 | 11.0 | 16-34 | 328 | 479 | Candy Robinson | MacGregor Park | Earnest Rhone (4) | Rashad Ford (6) | Conf Champions, CWS Regionals |
| 5 | Arkansas-Pine Bluff | Golden Lions | 6 | 18 | .250 | 12.0 | 10-33 | 261 | 500 | -- | Regional Park | Jerome McCollum (6) | Daniel Gathright (17) | |