| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Canisius College | Golden Griffins | 19 | 5 | .792 | -- | 41-13 | 452 | 275 | Mike McRae | Demske Sports Complex | Kevin Mailloux (2) | Shane Davis (1) | |
| 2 | Manhattan College | Jaspers | 19 | 5 | .792 | -- | 31-20 | 396 | 321 | Kevin Leighton | Van Cortlandt Park | Dom Lombardi (4) | Dan Forman (12) | |
| 3 | Siena College | Saints | 15 | 8 | .652 | 3.5 | 30-26 | 365 | 359 | Tony Rossi | Siena Field | Jacob Willis (5) | Dan Lazzaroni (8) | Conf Finalists |
| 4 | Rider ** | Broncs | 13 | 10 | .565 | 5.5 | 29-28 | 323 | 364 | Barry Davis | Sonny Pittaro Field | Sean Olson (1) | Jimmer Kennedy (4) | Conf Champions, CWS Regionals |
| 5 | Fairfield | Stags | 11 | 13 | .458 | 8.0 | 14-36 | 213 | 397 | John Slosar | Alumni Diamond | Peter Allen (31) | Rob Gariano (7) | |
| 6 | Niagara | Purple Eagles | 10 | 14 | .417 | 9.0 | 22-28 | 279 | 300 | Chris Chernisky | Sal Maglie Stadium | Tim Alberts (8) | Daniel Morari (5) | |
| 7 | Marist College | Red Foxes | 8 | 15 | .348 | 10.5 | 19-28 | 216 | 249 | Dennis Healy | McCann Baseball Field | Richard Curylo (37) | Josh Rickards (10) | |
| 8 | Saint Peter's College | Peacocks | 7 | 16 | .304 | 11.5 | 20-30 | 296 | 390 | Derek England | Jaroschak Field | Dennis Alexander (20) | Santo Maertz (22) | |
| 9 | Iona College | Gaels | 4 | 20 | .167 | 15.0 | 4-44 | 150 | 405 | Pat Carey | Salesian Field | Andrew Wernicki (34) | Shane Sveda (3) |