| Eastern | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Jackson State | Tigers | 17 | 7 | .708 | -- | 33-23 | 437 | 357 | Omar Johnson | JSU Baseball Complex | Anthony McLin (1) | David Delacalle (8) | |
| 2 | Alcorn State | Braves | 15 | 9 | .625 | 2.0 | 25-20 | 290 | 250 | Willie McGowan | ASU Baseball Park | Marcus Davis (6) | Joseph Gonzalez (5) | |
| 3 | Miss. Valley St | Delta Devils | 14 | 10 | .583 | 3.0 | 19-36 | 278 | 505 | Doug Shanks | Sean Bard (2) | Scott Reid (3) | ||
| 4 | Alabama State | Hornets | 7 | 14 | .333 | 8.5 | 12-25 | 238 | 336 | Larry Watkins | Paterson Field | John Stevens (7) | Joshua Froneberger (6) | |
| 5 | Alabama A&M | Bulldogs | 4 | 17 | .190 | 11.5 | 10-29 | 176 | 302 | Tom Wesley | Bulldog Field | Ladale Hayes (16) | Kevin Collins (15) | |
| Western | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Prairie View A&M ** | Panthers | 17 | 7 | .708 | -- | 34-25 | 436 | 338 | Michael Robertson | Panther Field | Michael Richard (5) | Wrandal Taylor (1) | Conf Champions, CWS Regionals |
| 2 | Southern | Jaguars | 15 | 9 | .625 | 2.0 | 26-18 | 308 | 265 | Roger Cador | Lee-Hines Field | J Mendoza (17) | Roydrick Merritt (2) | Conf Finalists |
| 3 | Arkansas-Pine Bluff | Golden Lions | 10 | 14 | .417 | 7.0 | 14-30 | 230 | 356 | -- | Regional Park | Reggi Barker (27) | Justin Moring (9) | |
| 4 | Grambling State | Tigers | 9 | 15 | .375 | 8.0 | 18-29 | 297 | 410 | Barret Rey | Richard Amaro (30) | Mario Jefferson (14) | ||
| 5 | Texas Southern | Tigers | 9 | 15 | .375 | 8.0 | 13-28 | 242 | 367 | Candy Robinson | MacGregor Park | Adam Sellers (42) | Rashad Ford (27) | |