| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Rice ** | Owls | 22 | 2 | .917 | -- | 56-13 | 511 | 260 | Wayne Graham | Reckling Park | Joe Savery (2) | Ryan Berry (2) | Conf Champions, CWS Final-8, #3 in Nation |
| 2 | East Carolina | Pirates | 14 | 9 | .609 | 7.5 | 40-23 | 403 | 298 | Billy Godwin | Clark-LeClair Stadium | Ryan Tousley (12) | Shane Mathews (15) | Conf Finalists, CWS Regionals |
| 3 | Southern Miss | Golden Eagles | 14 | 10 | .583 | 8.0 | 39-23 | 380 | 269 | Corky Palmer | Pete Taylor Park | Trey Sutton (1) | Ryan Belanger (1) | CWS Regionals |
| 4 | Memphis | Tigers | 12 | 12 | .500 | 10.0 | 36-27 | 431 | 432 | Daron Schoenrock | Nat Buring Stadium | Michael Murray (6) | Matt Yokley (26) | CWS Regionals |
| 5 | Houston | Cougars | 12 | 12 | .500 | 10.0 | 28-28 | 341 | 330 | Rayner Noble | Cougar Field | Ryan Lormand (32) | Wes Musick (16) | |
| 6 | Alabama-Birmingham | Blazers | 12 | 12 | .500 | 10.0 | 25-33 | 374 | 377 | Brian Shoop | Jerry D. Young Memorial F | J.R. Bond (10) | Mitch Kloskowski (30) | |
| 7 | Tulane | Green Wave | 9 | 15 | .375 | 13.0 | 34-26 | 335 | 266 | Rick Jones | Greer Field at Turchin St | Brad Emaus (23) | Brandon Gomes (3) | |
| 8 | Central Florida | Golden Knights | 7 | 17 | .292 | 15.0 | 27-32 | 313 | 397 | Jay Bergman | Jay Bergman Field | Kiko Vazquez (4) | Justin Weiss (10) | |
| 9 | Marshall | Thundering Herd | 5 | 18 | .217 | 16.5 | 21-32 | 289 | 411 | Jeff Waggoner | Appalachian Power Park | Brendan Murphy (47) | Adam Dobies (22) |