| East | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Miss. Valley St | Delta Devils | 20 | 4 | .833 | -- | 24-32 | 325 | 521 | Doug Shanks | Rod Williams (1) | Danny Hall (8) | - | |
| 2 | Alcorn State | Braves | 18 | 6 | .750 | 2.0 | 26-21 | 249 | 170 | Willie McGowan | ASU Baseball Park | Marcus Davis (9) | Darryl Jordan (7) | Conf Finalists |
| 3 | Alabama State | Hornets | 9 | 14 | .391 | 10.5 | 9-26-1 | 224 | 350 | Larry Watkins | Paterson Field | Selmon Pearson (7) | Joshua Froneberger (5) | - |
| 4 | Alabama A&M | Bulldogs | 3 | 20 | .130 | 16.5 | 8-27-1 | 212 | 408 | Tom Wesley | Bulldog Field | Bryan Evans (39) | Kevin Collins (26) | - |
| 5 | Jackson State | Tigers | 1 | 23 | .042 | 19.0 | 22-17 | 368 | 288 | Mark Salter | JSU Baseball Complex | Joaquin Rodriguez (3) | Ashkelon Stapleton (4) | - |
| West | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Prairie View A&M ** | Panthers | 17 | 7 | .708 | -- | 33-22 | 448 | 402 | Michael Robertson | Michael Richard (2) | Wrandal Taylor (2) | Conf Champions, CWS Regionals | |
| 2 | Southern | Jaguars | 17 | 8 | .680 | -- | 26-20 | 255 | 250 | Roger Cador | Lee-Hines Field | Demarcus Coats (10) | Joshua Kirk (13) | - |
| 3 | Texas Southern | Tigers | 15 | 9 | .625 | 2.0 | 19-30 | 276 | 380 | Candy Robinson | MacGregor Park | Donald Green (24) | Issac Daniels (1) | - |
| 4 | Arkansas-Pine Bluff | Golden Lions | 8 | 15 | .348 | 8.5 | 14-25 | 196 | 260 | Elbert Bennett | Regional Park | Jose Rivera (33) | Aaron Terry (10) | - |
| 5 | Grambling State | Tigers | 3 | 21 | .125 | 14.0 | 6-35 | 157 | 423 | Sap Randall | Marvin Mercer (40) | Demetrius Marshall (12) | - | |