| East | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Kent State | Golden Flashes | 19 | 7 | .731 | -- | 38-19 | 446 | 263 | Scott Stricklin | Olga Mural Field at Schoo | Drew Saylor (1) | Chad Wagler (2) | Conf Finalists |
| 2 | Miami | RedHawks | 17 | 10 | .630 | 2.5 | 33-25 | 312 | 264 | Dan Simonds | McKie Field at Hayden Par | Brandon Hillier (26) | Graham Taylor (5) | - |
| 3 | Ohio | Bobcats | 14 | 13 | .519 | 5.5 | 22-25 | 320 | 324 | Joe Carbone | Bob Wren Stadium | Anthony Gressick (11) | Yale Silverman (15) | - |
| 4 | Bowling Green State | Falcons | 11 | 16 | .407 | 8.5 | 26-27 | 322 | 322 | Dan Schmitz | Warren E. Steller Field | Eric Lawson (15) | Alan Brech (45) | - |
| 5 | Akron | Zips | 8 | 18 | .308 | 11.0 | 15-36 | 306 | 369 | Pat Bangston | Lee R. Jackson Field | Kurt Davidson (17) | Ross Liersemann (6) | - |
| 6 | University at Buffalo | Bulls | 6 | 21 | .222 | 13.5 | 15-37 | 250 | 421 | Bill Breene | Amherst Audubon Field | James Kingsley (32) | Sean McWilliams (28) | - |
| West | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Central Michigan | Chippewas | 17 | 9 | .654 | -- | 35-23 | 428 | 366 | Steve Jaksa | Theunissen Stadium | Ben Humphrey (4) | Ty Dunham (8) | - |
| 2 | Ball State ** | Cardinals | 16 | 9 | .640 | -- | 37-20 | 408 | 324 | Greg Beals | Ball Diamond | Brad Miller (3) | Kyle Heyne (3) | Conf Champions, CWS Regionals |
| 3 | Western Michigan | Broncos | 16 | 9 | .640 | -- | 30-22 | 304 | 253 | Randy Ford | Hyames Field | Zach Gentile (30) | Dan O'Brien (9) | - |
| 4 | Eastern Michigan | Eagles | 14 | 12 | .538 | 3.0 | 27-27 | 272 | 293 | Roger Coryell | Oestrike Stadium | Steve Bradshaw (25) | Jeff Fischer (1) | - |
| 5 | Toledo | Rockets | 11 | 15 | .423 | 6.0 | 26-27 | 291 | 342 | Cory Mee | Scott Park Baseball Compl | Jason Watson (23) | Levi Curry (41) | - |
| 6 | Northern Illinois | Huskies | 8 | 18 | .308 | 9.0 | 24-31 | 317 | 372 | Ed Mathey | Ralph McKinzie Field | Brian Toner (8) | Matt German (4) | - |