| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Marist College ** | Red Foxes | 22 | 5 | .815 | -- | 33-21 | 329 | 277 | Joe Raccula | McCann Baseball Field | Travis Musolf (2) | Chris Tracz (2) | Conf. Champions, CWS Regionals |
| 2 | Siena College | Saints | 19 | 5 | .792 | 1.5 | 29-23 | 281 | 278 | Tony Rossi | Siena Field | Jacob Willis (24) | John Lannan (1) | - |
| 3 | Manhattan College | Jaspers | 15 | 8 | .652 | 5.0 | 27-21 | 337 | 243 | Steve Trimper | Van Cortlandt Park | Matt Rizzotti (1) | Chris Cody (3) | - |
| 4 | Niagara | Purple Eagles | 16 | 9 | .640 | 5.0 | 25-28 | 283 | 278 | Chris Chernisky | Sal Maglie Stadium | Andrew MacNevin (12) | Dan Griffin (5) | Conf. Finalists |
| 5 | Le Moyne College | Dolphins | 14 | 11 | .560 | 7.0 | 25-22 | 292 | 249 | Steve Owens | Dick RockwellField | Keith Connors (3) | Bobby Blevins (4) | - |
| 6 | Rider | Broncs | 14 | 13 | .519 | 8.0 | 24-29 | 289 | 369 | Barry Davis | Sonny Pittaro Field | Tom Letezia (10) | Joe Moronese (19) | - |
| 7 | Fairfield | Stags | 13 | 14 | .481 | 9.0 | 15-33 | 268 | 373 | John Slosar | Alumni Diamond | John Scaife (7) | Tim Dugan (10) | - |
| 8 | Iona College | Gaels | 8 | 18 | .308 | 13.5 | 11-38 | 189 | 374 | Al Zoccolillo | Salesian Field | Dan Potocki (31) | Chris Lopez (26) | - |
| 9 | Canisius College | Golden Griffins | 5 | 21 | .192 | 16.5 | 9-38 | 228 | 428 | Mike McRae | Demske Sports Complex | Matt Mazurek (4) | Mike Bax (23) | - |
| 10 | Saint Peter's College | Peacocks | 2 | 24 | .077 | 19.5 | 5-45 | 168 | 571 | Derek England | Jaroschak Field | Dennis Alexander (39) | Adam Myers (28) | - |