| East | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Kent State | Golden Flashes | 20 | 4 | .833 | -- | 36-18 | 416 | 304 | Rich Rembielak | Gene Michael Field | Chris Welsch (7) | Dirk Hayhurst (5) | - |
| 2 | Miami | RedHawks | 19 | 9 | .679 | 3.0 | 36-24-1 | 450 | 364 | Tracy Smith | McKie Field at Hayden Par | David Cook (3) | Michael Gardner (10) | Conf. Finalists |
| 3 | Ohio | Bobcats | 15 | 11 | .577 | 6.0 | 35-23 | 401 | 304 | Joe Carbone | Bob Wren Stadium | Adam Fox (5) | Marc Cornell (7) | - |
| 4 | Akron | Zips | 12 | 15 | .444 | 9.5 | 22-30 | 249 | 281 | Tim Berenyi | Lee R. Jackson Field | Craig Welch (39) | Frank Mendoza (8) | - |
| 5 | Marshall | Thundering Herd | 11 | 16 | .407 | 10.5 | 22-31-1 | 310 | 399 | Dave Piepenbrink | University Heights | Corie O'Bryan (15) | Grant Harper (16) | - |
| 6 | University at Buffalo | Bulls | 5 | 21 | .192 | 16.0 | 16-37 | 241 | 366 | Bill Breene | Amherst Audubon Field | Phil Vanhorne (34) | Tyler Balentine (35) | - |
| West | ||||||||||||||
| Rk | Team | Nickname | W | L | Pct | Gbl | Overall | RF | RA | Manager | Stadium | Top Batter | Top Pitcher | Playoffs |
| 1 | Ball State | Cardinals | 17 | 10 | .630 | -- | 36-21 | 417 | 318 | Greg Beals | Ball Diamond | Brad Snyder (1) | Brian Lynch (1) | - |
| 2 | Eastern Michigan ** | Eagles | 16 | 11 | .593 | 1.0 | 32-26 | 401 | 399 | Roger Coryell | Oestrike Stadium | Derrick Peterson (9) | Dave Pieron (9) | Conf. Champs, CWS Regionals |
| 3 | Northern Illinois | Huskies | 15 | 11 | .577 | 1.5 | 34-24 | 408 | 360 | Ed Mathey | Ralph McKinzie Field | Joe Mazzuca (4) | Mark Skrukrud (2) | - |
| 4 | Western Michigan | Broncos | 16 | 12 | .571 | 1.5 | 25-26 | 227 | 258 | Fred Decker | Hyames Field | Tom Fabrizio (24) | Keith Perez (3) | - |
| 5 | Central Michigan | Chippewas | 9 | 15 | .375 | 6.5 | 25-28 | 351 | 384 | Steve Jaksa | Theunissen Stadium | Mike Gates (25) | David Lemieux (20) | - |
| 6 | Bowling Green State | Falcons | 9 | 18 | .333 | 8.0 | 17-28 | 248 | 270 | Dan Schmitz | Warren E. Steller Field | Kelly Hunt (8) | Kyle Knoblauch (11) | - |
| 7 | Toledo | Rockets | 8 | 19 | .296 | 9.0 | 22-29 | 391 | 377 | Joe Kruzel | Scott Park Baseball Compl | Mitch Maier (2) | J.R. Duffey (18) | - |