| 1 | 26 | June-Reg | James Simmons | $$ | P | 20 | 9/29/1986 | 6-3 | 205 | R | R | AA | | University of California-Riverside |
| 1 | 59 | June-Reg | Corey Brown | | OF | 21 | 11/26/1985 | 6-2 | 210 | L | L | A | | Oklahoma State University |
| 2 | 90 | June-Reg | Josh Horton | | SS | 21 | 2/19/1986 | 6-1 | 195 | L | R | A+ | | University of North Carolina |
| 3 | 120 | June-Reg | Sam Demel | | P | 21 | 10/23/1985 | 6-0 | 210 | R | R | A+ | | Texas Christian University |
| 5 | 180 | June-Reg | Andrew Carignan | | P | 20 | 7/23/1986 | 5-11 | | R | R | AA | | University of North Carolina |
| 6 | 210 | June-Reg | Scott Hodsdon | | P | 22 | 5/31/1985 | 6-2 | 195 | R | R | A | | Azusa Pacific University (Calif.) |
| 7 | 240 | June-Reg | Lance Sewell | | P | 21 | 6/17/1986 | 6-3 | 205 | L | L | A | | San Diego State University |
| 11 | 360 | June-Reg | Michael Richard | | SS | 22 | 8/20/1984 | 5-10 | 175 | R | R | A | | Prairie View A&M University |
| 12 | 390 | June-Reg | Gary Brown | | OF/2B | 18 | 9/28/1988 | 6-0 | 170 | R | R | - | | Diamond Bar High School (Diamond Bar,CA) |
| 13 | 420 | June-Reg | Justin Friend | | P | 21 | 6/21/1986 | 6-1 | 205 | R | R | A | | Oklahoma State University |
| 15 | 480 | June-Reg | Brad Hertzler | | P | 21 | 4/11/1986 | 6-1 | 210 | R | L | A | | University of Maine-Orono |
| 17 | 540 | June-Reg | Stephen Hunt | | P | 18 | 1/11/1989 | 5-11 | 190 | L | L | - | | Jesuit High School (Tampa,FL) |
| 18 | 570 | June-Reg | Matt Ray | | SS | 23 | 1/28/1984 | 5-9 | 190 | S | R | A | | Middle Tennessee State University |
| 22 | 690 | June-Reg | Aaron Jenkins | | P | 22 | 11/14/1984 | 5-8 | 180 | L | L | A- | | University of Northern Iowa |
| 24 | 750 | June-Reg | Raymond Rodriguez | | C | 17 | 8/11/1989 | 6-2 | 191 | R | R | Rookie | | Puerto Rico Baseball Academy High School (Gurabo,PR) |
| 26 | 810 | June-Reg | Tobias Streich | | C | 19 | 4/5/1988 | 6-0 | | R | R | - | | Ridgway High School (Ridgway,PA) |
| 27 | 840 | June-Reg | Justin Frash | | 3B | 23 | 4/26/1984 | 5-10 | 190 | L | R | A | | University of Hawaii-Manoa |
| 28 | 870 | June-Reg | Lee Land | | P | 22 | 8/7/1984 | 6-2 | 220 | R | R | A- | | University of North Carolina-Greensboro |
| 32 | 988 | June-Reg | Bryan Collins | | P | 22 | 9/10/1984 | 6-1 | 210 | R | R | A- | | Central Missouri State University |
| 33 | 1017 | June-Reg | John Quine | | P | 23 | 10/8/1983 | 6-0 | 180 | R | R | A- | | University of San Francisco |
| 35 | 1075 | June-Reg | Herbert Hudson | | OF | 21 | 9/13/1985 | 5-11 | 170 | R | R | Rookie | | Mt. San Jacinto (Calif.) Junior College |
| 37 | 1131 | June-Reg | Nick Longmire | | OF | 18 | 1/5/1989 | 6-3 | 180 | R | R | - | | Grossmont High School (El Cajon,CA) |
| 38 | 1159 | June-Reg | Kevin Rath | | P | 17 | 8/18/1989 | 6-5 | 240 | L | L | - | | Silverado High School (Las Vegas,NV) |
| 40 | 1214 | June-Reg | Daniel Magante | | C | 18 | 11/22/1988 | 6-0 | 170 | R | R | - | | Camphell Hall (North Hollywood,CA) |
| 41 | 1240 | June-Reg | James Wemke | | P | 18 | 8/5/1988 | 6-2 | 175 | L | L | - | | Troy High School (Fullerton,CA) |
| 45 | 1343 | June-Reg | Jeremy Wise | | 1B/3B | 21 | 6/2/1986 | 6-1 | 205 | R | R | - | | Louisiana State University |
| 46 | 1366 | June-Reg | Conner Bernatz | | OF | 17 | 8/17/1989 | 6-2 | 170 | R | R | - | | Mater Dei High School (Santa Ana,CA) |
| 47 | 1388 | June-Reg | Seth Blair | | P | 18 | 3/3/1989 | 6-2 | | R | R | - | | Rock Falls High School (Rock Falls,IL) |
| 49 | 1430 | June-Reg | Josh Bowman | | P | 18 | 9/9/1988 | 6-2 | 195 | R | R | - | | Northeast High School (St. Petersburg,FL) |
| 50 | 1451 | June-Reg | Steve Hagen | | 3B | 18 | 10/26/1988 | 6-1 | 195 | R | R | - | | Peninsula (Gig Harbor,WA) |