| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 6 | June-Reg | Ryan Harvey | $$ | OF | 18 | 8/30/1984 | 6-5 | 192 | R | R | AA | | Dunedin High School (Dunedin,FL) |
| 3 | 73 | June-Reg | Jake Fox | $$ | C | 20 | 7/20/1982 | 5-11 | 210 | R | R | MLB | 2007-2007 | University of Michigan |
| 4 | 103 | June-Reg | Tony Richie | | C | 21 | 2/9/1982 | 6-1 | 215 | R | R | AAA | | Florida State University |
| 5 | 133 | June-Reg | Darin Downs | | P | 18 | 12/26/1984 | 6-3 | 176 | R | L | AA | | Santaluces High School (Lantana,FL) |
| 6 | 163 | June-Reg | Sean Marshall | | P | 20 | 8/30/1982 | 6-6 | 195 | L | L | MLB | 2006-2008 | Virginia Commonwealth University |
| 7 | 193 | June-Reg | Kyle Boyer | | OF | 21 | 11/23/1981 | 6-1 | 199 | R | R | A+ | | California State University, Fullerton |
| 8 | 223 | June-Reg | Matt Lincoln | | P | 19 | 10/11/1983 | 6-1 | 205 | R | L | A | | Santa Ana College |
| 9 | 253 | June-Reg | Drew Larsen | | SS | 20 | 3/9/1983 | 6-0 | 190 | R | R | A+ | | Salt Lake Community College |
| 10 | 283 | June-Reg | Casey McGehee | | 3B | 20 | 10/12/1982 | 6-1 | 190 | R | R | AAA | | Fresno State University |
| 11 | 313 | June-Reg | Nick Jones | | 2B | 21 | 3/29/1982 | 6-1 | 185 | R | R | A+ | | Virginia Commonwealth University |
| 12 | 343 | June-Reg | Chuck Hickman | | SS | 22 | 5/24/1981 | 5-11 | 172 | R | R | A | | Nicholls State University |
| 13 | 373** | June-Reg | Ryan Coultas | | SS | 21 | 4/24/1982 | 6-3 | 180 | R | R | AA | | University of California, Davis |
| 14 | 403 | June-Reg | Matt LaPorta | | C | 18 | 1/8/1985 | 6-2 | 212 | R | R | AA | | Charlotte High School (Port Charlotte,FL) |
| 15 | 433 | June-Reg | Tony McQuade | | OF | 21 | 12/24/1981 | 6-2 | 205 | B | R | A+ | | Florida State University |
| 16 | 463 | June-Reg | Matt Weber | | P | 18 | 5/5/1985 | 6-3 | 200 | R | R | A+ | | Boylan Catholic High School (Rockford,IL) |
| 17 | 493 | June-Reg | Ryan Kalita | | P | 22 | 2/2/1981 | 6-2 | 210 | R | R | A | | University of Notre Dame |
| 18 | 523 | June-Reg | Trey Johnston | | 3B | 17 | 7/4/1985 | 5-11 | 190 | R | R | AA | | Schaumburg High School (Schaumburg,IL) |
| 19 | 553 | June-Reg | Brian Carter | | P | 21 | 11/21/1981 | 6-5 | 218 | L | L | A- | | University of Washington |
| 20 | 583 | June-Reg | Lance Dawkins | | SS | 21 | 1/31/1982 | 6-3 | 190 | R | R | A- | | McNeese State University |
| 21 | 613 | June-Reg | Reid Willett | | P | 21 | 3/25/1982 | 6-5 | 205 | R | R | A | | University of Rhode Island |
| 22 | 643 | June-Reg | Craig Green | | P | 21 | 11/8/1981 | 6-2 | 200 | R | R | A+ | | Bakersfield Junior College |
| 23 | 673 | June-Reg | Robert Ransom | | P | 21 | 8/25/1981 | 6-3 | 225 | R | R | AA | | Vanderbilt University |
| 24 | 703** | June-Reg | Sam Fuld | | OF | 21 | 11/20/1981 | 5-10 | 180 | L | L | MLB | 2007-2007 | Stanford University |
| 25 | 733** | June-Reg | Landon Powell | | C | 21 | 3/19/1982 | 6-3 | 230 | B | R | AAA | | University of South Carolina |
| 26 | 763** | June-Reg | Barret Browning | | P | 18 | 12/28/1984 | 6-1 | 170 | L | L | A+ | | Middle Georgia College |
| 27 | 793 | June-Reg | Jose Rios | | SS | 19 | 4/6/1984 | 6-1 | 160 | R | R | A | | |
| 28 | 823 | June-Reg | Adam Tidball | | C | 21 | 4/22/1982 | 6-4 | 218 | R | R | A | | University of Richmond |
| 29 | 853** | June-Reg | Matt Brown | | P | 20 | 8/14/1982 | 6-5 | 235 | R | R | College | | University of California |
| 30 | 883 | June-Reg | Corteze Armstrong | | OF | 19 | 6/9/1984 | 5-11 | 180 | L | R | Rookie | | Hiwassee College |
| 31 | 913 | June-Reg | Chris Ortmeier | | P | 18 | 11/8/1984 | 6-3 | 190 | R | R | College | | Marcus High School (Flower Mound,TX) |
| 32 | 943 | June-Reg | Adam Tobler | | P | 17 | 11/9/1985 | 6-5 | 195 | R | R | - | | Rochelle Township High School (Rochelle,IL) |
| 33 | 973 | June-Reg | Jasha Balcom | | OF | 20 | 7/7/1982 | 5-10 | 175 | L | R | A | | University of Georgia |
| 34 | 1003 | June-Reg | Adam Harvey | | C | 19 | 7/26/1983 | 6-0 | 215 | R | R | - | | Grayson County Junior College |
| 35 | 1033 | June-Reg | Sean Overholt | | P | 21 | 5/20/1982 | 6-1 | 195 | R | R | A+ | | University of Utah |
| 36 | 1063 | June-Reg | Jason Fellows | | 1B | 20 | 7/16/1982 | 6-3 | 173 | L | L | College | | Georgia Perimeter College |
| 37 | 1093 | June-Reg | Chris Ericksen | | P | 19 | 5/2/1984 | 6-5 | 180 | L | L | - | | South Suburban College |
| 38 | 1123 | June-Reg | Skyler Southwick | | P | 18 | 9/11/1984 | 6-4 | 175 | R | R | - | | Dixie Junior College |
| 39 | 1153 | June-Reg | David Gresky | | OF | 21 | 6/8/1982 | 6-3 | 210 | L | L | A- | | Northwestern University |
| 40 | 1183 | June-Reg | Danny Lopaze | | 1B | 22 | 12/13/1980 | 6-3 | 200 | L | R | A | | Virginia Commonwealth University |
| 41 | 1213 | June-Reg | Doug Low | | C | 18 | 4/5/1985 | 6-0 | 200 | R | R | College | | Foothill High School (Henderson,NV) |
| 42 | 1242** | June-Reg | Danny Calvert | | P | 18 | 8/16/1984 | 6-5 | 190 | R | R | - | | Grain Valley High School (Blue Springs,MO) |
| 43 | 1271** | June-Reg | Brandon Harmon | | P | 18 | 5/10/1985 | 6-5 | 200 | R | R | College | | Shadle Park High School (Spokane,WA) |
| 44 | 1299** | June-Reg | Kevin Hankerd | | 1B | 18 | 1/24/1985 | 6-3 | 180 | R | R | - | | South Hills High School (Covina,CA) |
| 45 | 1327 | June-Reg | Angel Sanchez | | C | 18 | 1/14/1985 | 6-0 | 180 | R | R | A- | | West Covina High School (West Covina,CA) |
| 46 | 1354 | June-Reg | Jefferies Tatford | | C | 18 | 9/16/1984 | 6-3 | 210 | L | R | A- | | St. Thomas More High School (Lafayette,LA) |
| 47 | 1381** | June-Reg | Justin Simmons | | P | 21 | 10/5/1981 | 6-3 | 225 | L | L | AAA | | University of Texas |
| 48 | 1408** | June-Reg | Tim Lincecum | | P | 19 | 6/15/1984 | 5-10 | 155 | L | R | MLB | 2007-2008 | Liberty High School (Renton,WA) |
| 49 | 1434** | June-Reg | Brian Cleveland | | SS | 21 | 1/7/1982 | 6-1 | 182 | R | R | AAA | | University of Tennessee |
| 50 | 1460 | June-Reg | Kris Rochelle | | C | 18 | 9/22/1984 | 6-2 | 210 | R | R | A- | | Mills Godwin High School (Richmond,VA) |
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