| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 2 | 74 | June-Reg | Will Hartley | | C | 18 | 12/24/1980 | 6-2 | 205 | B | R | Rookie | | Bradford High School (Starke,FL) |
| 3 | 107 | June-Reg | Eric Johnson | | RF | 21 | 8/14/1977 | 6-1 | 210 | R | R | AA | | Western Carolina University |
| 4 | 137** | June-Reg | Jeff Baker | | SS | 18 | 6/21/1981 | 6-2 | 210 | R | R | MLB | 2005-2008 | Gar-field High School (Woodbridge,VA) |
| 5 | 167 | June-Reg | Curtis Gay | | 1B | 21 | 9/12/1977 | 6-6 | 225 | L | L | A | | Oklahoma City University |
| 6 | 197 | June-Reg | Shane Wallace | | P | 18 | 12/29/1980 | 6-2 | 200 | L | L | AA | | Newman Smith High School (Carrollton,TX) |
| 7 | 227** | June-Reg | Daylon Monette | | OF | 18 | 4/8/1981 | 6-3 | 210 | B | R | A | | AB Miller High School (Fontana,CA) |
| 8 | 257 | June-Reg | Devin Rogers | | P | 20 | 8/4/1978 | 6-6 | 215 | R | R | A | | Nicholls State University |
| 9 | 287 | June-Reg | Stephen Cowie | | P | 22 | 11/9/1976 | 6-2 | 190 | R | R | A+ | | Duke University |
| 10 | 317 | June-Reg | Fernando Cabrera | | P | 17 | 11/16/1981 | 6-4 | 175 | R | R | MLB | 2004-2007 | Discipulos De Cristo (Bayamon,PR) |
| 11 | 347** | June-Reg | Monte Mansfield | | P | 18 | 3/22/1981 | 6-4 | 215 | R | R | AA | | Hesperia High School (Hesperia,CA) |
| 12 | 377 | June-Reg | Francis Finnerty | | OF | 18 | 3/19/1981 | 6-3 | 200 | B | R | A- | | Wellington Christian High School (Wellington,FL) |
| 13 | 407 | June-Reg | Adam Barr | | P | 18 | 4/30/1981 | 6-0 | 175 | L | L | A | | South Williamsport Area High School (South Williamsport,PA) |
| 14 | 437 | June-Reg | Joshua Martin | | P | | | | 0 | | | - | | Wyman King Academy High School (Columbia,SC) |
| 15 | 467 | June-Reg | Brody Lynn | | SS | 18 | 9/24/1980 | 6-2 | 200 | B | R | Rookie | | Kapaun-Mount Carmel High School (Wichita,KS) |
| 16 | 497 | June-Reg | Anthony Marini | | P | 22 | 1/22/1977 | 6-0 | 185 | R | L | A+ | - | Kennesaw State University |
| 17 | 527 | June-Reg | Chris Kelley | | P | 21 | 4/29/1978 | 6-2 | 180 | R | R | A | | College of William and Mary |
| 18 | 557 | June-Reg | Kyle Moyer | | 1B | 18 | 2/2/1981 | 6-2 | 240 | L | L | A | | Mohawk High School (Sycamore,OH) |
| 19 | 587 | June-Reg | Travis Santini | | OF | 18 | 11/23/1980 | 5-11 | 175 | R | R | A | | Lely High School (Naples,FL) |
| 20 | 617** | June-Reg | Louis Wieben | | P | | | | 0 | | | Ind | | St. Mary's High School (Rutherford,NJ) |
| 21 | 647 | June-Reg | Jason Davis | | P | 19 | 5/8/1980 | 6-6 | 230 | R | R | MLB | 2002-2007 | Cleveland State Community College |
| 22 | 677 | June-Reg | Jeff Reboin | | | | | | | | | Ind | | Sacramento City College |
| 23 | 707** | June-Reg | Anthony Tomey | | P | 17 | 8/17/1981 | 6-4 | 245 | R | R | AAA | | Detroit Catholic Central High School (Novi,MI) |
| 24 | 737 | June-Reg | Phil Rosengren | | P | 22 | 2/10/1977 | 6-5 | 210 | R | R | A | | Northwestern University |
| 25 | 767 | June-Reg | Chris Lotterhos | | 2B | 22 | 4/26/1977 | 5-10 | 165 | R | R | AAA | | Mississippi State University |
| 26 | 797 | June-Reg | Kyle Denney | | P | 21 | 7/27/1977 | 6-2 | 195 | R | R | MLB | 2004-2004 | University of Oklahoma |
| 27 | 827** | June-Reg | Jordan Olson | | P | 18 | 2/19/1981 | 6-3 | 190 | L | L | A | | Crescenta Valley High School (La Crescenta,CA) |
| 28 | 857 | June-Reg | Matt Spiess | | | | | | | | | College | | Owosso High School (Owosso,MI) |
| 29 | 887 | June-Reg | Roberto Vega | | C | | | | 0 | | | - | | Adela Brenes Texidor (Guayama,PR) |
| 30 | 917** | June-Reg | Willie Mckenzie | | | | | | | | | College | | Sullivan South High School (Kingsport,TN) |
| 31 | 947 | June-Reg | Leyson Rivera | | P | | | | 0 | | | Rookie | | Luz A Calderon (Carolina,PR) |
| 32 | 977 | June-Reg | Benjamin Fransico | | CF | | | | 0 | | | - | | Servite High School (Anaheim,CA) |
| 33 | 1007** | June-Reg | Scott Thomas | | C | 14 | 3/21/1985 | 5-11 | 202 | L | R | A- | | Watervliet High School (Watervliet,MI) |
| 34 | 1037** | June-Reg | Kerry Hodges | | OF | 19 | 11/7/1979 | 6-2 | 202 | R | R | AA | | New Mexico Junior College |
| 35 | 1067 | June-Reg | Mike Byrd | | P | 21 | 5/5/1978 | 6-5 | 220 | R | R | A | | Vanderbilt University |
| 36 | 1097 | June-Reg | Jerad Doty | | | 18 | 11/4/1980 | 6-1 | 223 | R | R | College | | Rio Vista High School (Rio Vista,CA) |
| 37 | 1127 | June-Reg | Edward Sullivan | | P | | | | 0 | | | A+ | | Duke University |
| 38 | 1157 | June-Reg | John Christ | | P | 21 | 9/10/1977 | 6-2 | 215 | L | R | A | | Johns Hopkins University |
| 39 | 1187 | June-Reg | Byron Ewing | | 1B | 22 | 10/22/1976 | 6-3 | 215 | R | R | A+ | | Howard College |
| 40 | 1217 | June-Reg | Neil Dudkowski | | P | | | | 0 | | | - | | Lassen Junior College |
| 41 | 1246** | June-Reg | Royce Ring | | P | 18 | 12/21/1980 | 6-5 | 220 | L | L | MLB | 2005-2008 | Monte Vista High School (Spring Valley,CA) |
| 42 | 1274** | June-Reg | Anthony Lunetta | | SS | 18 | 10/9/1980 | 5-10 | 185 | R | R | AA | | Arlington High School (Riverside,CA) |
| 43 | 1301 | June-Reg | Bradley Harrison | | LF | | | | 0 | | | - | | Mandarin High School (Jacksonville,FL) |
| 44 | 1328 | June-Reg | Mike Bishop | | C | 40 | 11/5/1958 | 6-2 | 188 | R | R | MLB | 1983-1983 | Kansas State University |
| 45 | 1353** | June-Reg | Doug Johnson | | P | 18 | 12/1/1980 | 6-1 | 185 | R | R | A+ | | Pelham High School (Pelham,NH) |
| 46 | 1377 | June-Reg | Jeff Becker | | | 22 | 12/20/1976 | 6-2 | 200 | R | R | A+ | | Duke University |
| 47 | 1401 | June-Reg | Samuel Button | | P | 21 | 12/8/1977 | 6-2 | 210 | L | L | A | | Jacksonville State University |
| 48 | 1425 | June-Reg | Simon Young | | P | 21 | 9/14/1977 | 6-4 | 240 | L | L | A+ | | Georgia Tech |
| 49 | 1448 | June-Reg | Neal Maybin | | | | | | | | | Rookie | | Brevard Community College |
| 50 | 1469** | June-Reg | John Gall | | 1B | 21 | 4/2/1978 | 6-0 | 195 | R | R | MLB | 2005-2007 | Stanford University |
| |
