| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 13 | June-Reg | J.M. Gold | $$ | P | 18 | 4/18/1980 | 6-5 | 220 | R | R | A+ | | Toms River North High School (Toms River,NJ) |
| 2 | 56 | June-Reg | Nick Neugebauer | | P | 17 | 7/15/1980 | 6-3 | 225 | R | R | MLB | 2001-2002 | Arlington High School (Riverside,CA) |
| 3 | 86 | June-Reg | Derry Hammond | | OF | 18 | 10/19/1979 | 6-2 | 205 | R | R | A+ | | West Point High School (West Point,MS) |
| 4 | 116** | June-Reg | Rhett Parrott | | P | 18 | 11/12/1979 | 6-2 | 180 | R | R | AAA | | Northwest High School (Tunnel Hill,GA) |
| 5 | 146 | June-Reg | Chris Pine | | P | 21 | 9/25/1976 | 6-2 | 210 | R | R | AAA | | Oregon State University |
| 6 | 176 | June-Reg | Bill Hall | | SS | 18 | 12/28/1979 | 6-0 | 175 | R | R | MLB | 2002-2008 | Nettleton High School (Nettleton,MS) |
| 7 | 206 | June-Reg | Jason Fox | | OF | 21 | 3/30/1977 | 6-2 | 185 | B | R | AA | | Florida Southern College |
| 8 | 236 | June-Reg | Mike Penney | | P | 21 | 3/29/1977 | 6-1 | 190 | R | R | AAA | | USC |
| 9 | 266 | June-Reg | Ryan Bordenick | | 3B | 22 | 12/7/1975 | 6-0 | 210 | R | R | A | | University of South Carolina |
| 10 | 296 | June-Reg | James Johnson | | P | 21 | 8/7/1976 | 6-1 | 175 | B | L | AAA | | University of Arizona |
| 11 | 326 | June-Reg | Jeff Pickler | | 3B | 22 | 1/6/1976 | 6-2 | 180 | L | R | AAA | | University of Tennessee |
| 12 | 356 | June-Reg | Chris Barton | | P | 21 | 7/30/1976 | 6-4 | 214 | R | R | A+ | | University of Connecticut |
| 13 | 386** | June-Reg | Heath McMurray | | P | 19 | 5/22/1979 | 6-3 | 195 | R | R | A | | San Jacinto College-North |
| 14 | 416** | June-Reg | Chuck Kegley | | P | 18 | 12/17/1979 | 6-3 | 205 | R | R | AA | | Middleburg High School (Middleburg,FL) |
| 15 | 446 | June-Reg | Jose Montenegro | | | 22 | 4/26/1976 | 6-0 | 185 | R | R | A+ | | University of Oklahoma |
| 16 | 476 | June-Reg | Hector Guadalupe | | SS | | | | 0 | | | - | | Arundel Sr. (Caguas,PR) |
| 17 | 506 | June-Reg | Steve Correa | | P | 18 | 5/24/1980 | 6-5 | 255 | L | L | A- | | Elk Grove High School (Elk Grove,CA) |
| 18 | 536 | June-Reg | Ricky Lewis | | P | | | | 0 | | | A | | University of Mississippi |
| 19 | 566 | June-Reg | Scott Geitz | | P | 20 | 7/6/1977 | 6-4 | 190 | R | R | A | | Southwest Michigan State University |
| 20 | 596** | June-Reg | Jeff Becker | | | 21 | 12/20/1976 | 6-2 | 200 | R | R | A+ | | Duke University |
| 21 | 626 | June-Reg | Ryan Poe | | P | 20 | 9/3/1977 | 6-2 | 220 | R | R | AA | | Saddleback High School (Santa Ana,CA) |
| 22 | 656** | June-Reg | Erik Smallwood | | OF | 18 | 9/5/1979 | 5-10 | 180 | L | R | A | | Tate High School (Cantonment,FL) |
| 23 | 686 | June-Reg | Elliott Ayala | | IF | 19 | 11/7/1978 | 5-9 | 160 | R | R | A+ | | Northeast Tech High School (Bronx,NY) |
| 24 | 716 | June-Reg | Fontella Jones | | P | 23 | 5/25/1975 | 6-2 | 210 | R | R | A+ | | Mississippi Valley State University |
| 25 | 746 | June-Reg | Jack Krawczyk | | P | 22 | 8/12/1975 | 6-4 | 210 | R | R | AAA | | USC |
| 26 | 776 | June-Reg | Dan Mathews | | P | 22 | 12/22/1975 | 6-0 | 175 | R | R | A+ | | Indiana University of Pennsylvania |
| 27 | 806 | June-Reg | Jonathan Harraid | | P | 22 | 11/23/1975 | 6-0 | 190 | R | R | Rookie | | Sam Houston State University |
| 28 | 836 | June-Reg | Tyrone Wayne | | RF | 22 | 8/30/1975 | 5-9 | 180 | R | R | Rookie | | St. John's University |
| 29 | 866 | June-Reg | Eduardo Figueroa | | | 16 | 6/4/1982 | 6-2 | 164 | R | R | AAA | | University of Tennessee |
| 30 | 896 | June-Reg | Casey Davis | | OF | | | | | | | - | | Wichita State University |
| 31 | 926 | June-Reg | Lee Jaramillo | | C | 21 | 12/14/1976 | 5-11 | 185 | R | R | A+ | | University of Wisconsin |
| 32 | 956 | June-Reg | Roberto Maysonet | | P | 18 | 1/16/1980 | 6-0 | 175 | R | R | A+ | | |
| 33 | 986 | June-Reg | Richard Mackiewitz | | 1B | 22 | 6/6/1976 | 6-2 | 217 | L | L | AA | | University of North Florida |
| 34 | 1016 | June-Reg | Curt Kautsch | | P | | | | 0 | | | - | | University of Texas |
| 35 | 1046 | June-Reg | Stephen York | | OF | | | | 0 | | | - | | University of Arizona |
| 36 | 1076 | June-Reg | William Eaton | | | 22 | 3/23/1976 | 6-0 | 170 | R | R | Rookie | | University of South Florida |
| 37 | 1106** | June-Reg | Al Corbeil | | | 19 | 12/16/1978 | 6-0 | 190 | L | R | A+ | | Manatee Community College |
| 38 | 1136 | June-Reg | Jonathan Kuelz | | P | | | | 0 | | | - | | West Lutheran High School (Minnetonka,MI) |
| 39 | 1166 | June-Reg | Dustin Wagoner | | P | | | | 0 | | | - | | Corona High School (Corona,CA) |
| 40 | 1196 | June-Reg | Kenneth Harold | | C | | | | 0 | | | - | | Denham Springs High School (Denham Springs,LA) |
| 41 | 1226 | June-Reg | Brian Wojtkowski | | OF | | | | 0 | | | - | | Peoria High School (Peoria,AZ) |
| 42 | 1256 | June-Reg | Christopher Vallette | | P | | | | 0 | | | - | | Angelina College |
| 43 | 1284 | June-Reg | Pedro Gavillan | | 3B | | | | 0 | | | - | | Leonard High School (Lake Worth,FL) |
| 44 | 1310** | June-Reg | Jeffrey Eure | | 1B | 17 | 8/17/1980 | 6-1 | 200 | L | L | AA | | Upper Dauphin High School (Pillow,PA) |
| 45 | 1334** | June-Reg | Devin Butler | | 1B | | | | 0 | | | - | | Key West High School (Key West,FL) |
| 46 | 1357 | June-Reg | Nicholas Murphy | | P | | | | 0 | | | - | | University of Central Florida |
| 47 | 1379** | June-Reg | Landon Jacobsen | | P | 19 | 5/4/1979 | 6-3 | 203 | R | R | AAA | | Trinidad State Junior College |
| 48 | 1400 | June-Reg | Chad Christianson | | | | | | | | | College | | Seabreeze High School (Daytona Beach,FL) |
| 49 | 1418 | June-Reg | Nicholas Wash | | 3B | | | | 0 | | | - | | Picayune High School (Picayune,MS) |
| 50 | 1434 | June-Reg | Michael Wojtkowski | | OF | | | | 0 | | | - | | Peoria High School (Peoria,AZ) |
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