| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 18 | June-Reg | Seth Etherton | $$ | P | 21 | 10/17/1976 | 6-1 | 200 | R | R | MLB | 2000-2006 | USC |
| 2 | 61 | June-Reg | Brandon Emanuel | | P | 22 | 4/9/1976 | 6-3 | 210 | R | R | AAA | | University of Northwest Louisiana |
| 3 | 91 | June-Reg | Paul French | | | | | | | | | College | | Northgate High School (Walnut Creek,CA) |
| 4 | 121 | June-Reg | Brian Oliver | | 2B | 21 | 11/7/1976 | 5-10 | 170 | R | R | AA | - | University of California |
| 5 | 151 | June-Reg | Darren Blakely | | OF | 21 | 3/14/1977 | 6-0 | 190 | B | R | AAA | | University of Hawaii-Manoa |
| 6 | 181 | June-Reg | Jay Hood | | SS | 21 | 3/8/1977 | 6-0 | 185 | R | R | AA | | Georgia Tech |
| 7 | 211 | June-Reg | Jeff Hundley | | P | 21 | 2/19/1977 | 6-2 | 205 | L | L | AAA | | Bowling Green State University |
| 8 | 241 | June-Reg | Jason Hill | | C | 21 | 3/17/1977 | 6-3 | 210 | R | R | AAA | | University of California |
| 9 | 271 | June-Reg | Kevin Mcclain | | P | 20 | 2/22/1978 | 6-4 | 180 | R | R | AA | | University of Central Florida |
| 10 | 301** | June-Reg | Justin Lehr | | P | 20 | 8/3/1977 | 6-1 | 200 | R | R | MLB | 2004-2006 | USC |
| 11 | 331 | June-Reg | William Mott | | OF | 22 | 1/2/1976 | 6-2 | 180 | L | R | AA | | Santa Clara University |
| 12 | 361 | June-Reg | Ed Welch | | OF | 18 | 2/22/1980 | 6-0 | 190 | L | R | A | | West Point Grey High School (Vancouver,BC) |
| 13 | 391 | June-Reg | Greg Jacobs | | H | 21 | 10/9/1976 | 5-10 | 180 | L | L | AAA | | California State University, Fullerton |
| 14 | 421 | June-Reg | Jason Huisman | | SS | 22 | 4/16/1976 | 6-3 | 195 | R | R | AA | | University of Mississippi |
| 15 | 451 | June-Reg | Jaime Germaine | | 3B | | | | 0 | | | - | | Jose Campeche High School (San Lorenzo,PR) |
| 16 | 481 | June-Reg | Justin Ross | | OF | 21 | 12/24/1976 | 6-2 | 193 | L | L | A+ | | University of Tennessee |
| 17 | 511 | June-Reg | Doug Bridges | | | 21 | 7/20/1976 | 6-2 | 185 | L | L | A+ | | Embry-Riddle University |
| 18 | 541 | June-Reg | Casey Kelley | | 1B | 21 | 11/4/1976 | 6-2 | 220 | L | R | A | | University of Washington |
| 19 | 571** | June-Reg | Justin Stine | | P | 21 | 5/7/1977 | 6-1 | 198 | R | L | A | | University of Missouri |
| 20 | 601 | June-Reg | Ed Hurtado | | P | 21 | 9/29/1976 | 6-1 | 200 | R | R | A- | | University of California-Riverside |
| 21 | 631 | June-Reg | Oliver Harwas | | P | 22 | 8/7/1975 | 6-3 | 210 | R | R | A | | Warner South High School (Okeechobee,FL) |
| 22 | 661 | June-Reg | Chad Berryman | | P | 21 | 8/2/1976 | 6-3 | 190 | R | R | A+ | | Virginia Commonwealth University |
| 23 | 691 | June-Reg | Ryan Braun | | P | 17 | 7/29/1980 | 6-1 | 200 | R | R | MLB | 2006-2007 | Edison High School (Fresno,CA) |
| 24 | 721 | June-Reg | Christopher Demouy | | P | 22 | 11/3/1975 | 6-1 | 205 | R | L | AAA | | Louisiana State University |
| 25 | 751 | June-Reg | Tommy Bond | | | 22 | 3/2/1976 | 6-4 | 200 | R | R | A- | | University of Florida |
| 26 | 781 | June-Reg | Josh Shaffer | | IF | 18 | 6/26/1980 | 6-1 | 180 | L | R | AA | | Esperanza High School (Anaheim,CA) |
| 27 | 811 | June-Reg | Simon Stoner | | | | | | | | | College | | Pasco-Hernando Community College |
| 28 | 841 | June-Reg | Greg Moore | | P | 19 | 5/23/1979 | 6-6 | 215 | R | R | A | | Ohio Wesleyan University |
| 29 | 871 | June-Reg | Angel Diaz | | C | 21 | 7/27/1976 | 6-0 | 198 | R | R | AAA | | University of Tampa |
| 30 | 901** | June-Reg | Ronte Langs | | OF | 19 | 1/29/1979 | 5-10 | 200 | R | R | A+ | | Gulf Coast Community College |
| 31 | 931 | June-Reg | Mike Leach | | P | 22 | 2/21/1976 | 6-3 | 205 | R | R | A- | | University of Florida |
| 32 | 961 | June-Reg | Ryan Flanagan | | P | 19 | 8/20/1978 | 6-2 | 190 | R | R | Rookie | | Gulf Coast (Pittsburgh.) |
| 33 | 991 | June-Reg | Ken Corley | | 1B | 22 | 3/30/1976 | 6-2 | 185 | R | R | Rookie | | University of Arizona |
| 34 | 1021** | June-Reg | Bobby Crosby | | SS | 18 | 1/12/1980 | 6-3 | 195 | R | R | MLB | 2003-2008 | La Quinta High School (Westminster,CA) |
| 35 | 1051** | June-Reg | Ben Margalski | | C | 18 | 9/2/1979 | 6-2 | 210 | L | R | A+ | | Belleville High School (Highridge,MO) |
| 36 | 1081 | June-Reg | Mike Christensen | | 3B | 22 | 5/24/1976 | 6-2 | 190 | R | R | AA | | Florida International University |
| 37 | 1111 | June-Reg | Matthew Tucek | | P | | | | 0 | | | - | | Waxahachie High School (Waxahachie,TX) |
| 38 | 1141 | June-Reg | Christopher Aronson | | P | 22 | 9/3/1975 | 6-0 | 185 | R | R | Rookie | | George Mason University |
| 39 | 1171 | June-Reg | Brad Downing | | OF | 22 | 5/10/1976 | 6-0 | 200 | L | R | A+ | | California High School (Whittier,CA) |
| 40 | 1201 | June-Reg | Will Croud | | OF | 22 | 12/29/1975 | 5-11 | 170 | B | R | A | | University of Central Florida |
| 41 | 1231 | June-Reg | Doug Wakefield | | P | 21 | 8/17/1976 | 6-7 | 240 | R | L | Rookie | | University of California |
| 42 | 1261 | June-Reg | Matt Lubozynski | | P | 21 | 11/9/1976 | 6-3 | 180 | L | L | AAA | | University of Central Florida |
| 43 | 1289 | June-Reg | Josh Warren | | P | 19 | 4/9/1979 | 6-5 | 220 | R | R | Rookie | | Polk Community College |
| 44 | 1315** | June-Reg | Jon Steitz | | P | 17 | 9/5/1980 | 6-3 | 210 | R | R | A | | Hopkins School High School (New Haven,CT) |
| 45 | 1339** | June-Reg | Cam Esslinger | | P | 21 | 12/28/1976 | 5-11 | 170 | R | R | AAA | | Seton Hall University |
| 46 | 1362 | June-Reg | Mario Mendoza | | SS | 19 | 1/19/1979 | 6-3 | 200 | R | R | AAA | | Central Arizona College |
| 47 | 1383 | June-Reg | Rudy Arguellas | | OF | | | | 0 | | | A | | Arizona State University |
| 48 | 1403 | June-Reg | Brian Ferreira | | OF | 19 | 2/16/1979 | 6-0 | 185 | L | L | Ind | | Manatee Community College |
| 49 | 1420 | June-Reg | Bryn Wade | | 2B | 22 | 7/1/1975 | 6-1 | 195 | R | R | A- | | Biola University (Calif.) |
| 50 | 1436 | June-Reg | Edgardo Salgado | | C | | | | 0 | | | Rookie | | Florida Air Academy High School (Melbourne,FL) |
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