| Rnd | Ovl | Phase | Player Name | $$ | Pos | Age | Born | Ht | Wt | B | T | High Level | MLB Years | Drafted From |
| 1 | 28 | June-Reg | Michael Barrett | $$ | SS | 18 | 10/22/1976 | 6-2 | 200 | R | R | MLB | 1998-2008 | Pace Academy High School (Atlanta,GA) |
| 2 | 58 | June-Reg | Henry Mateo | $$ | SS | 18 | 10/14/1976 | 5-11 | 170 | B | R | MLB | 2001-2006 | |
| 3 | 87 | June-Reg | Kenny James | | OF | 18 | 10/10/1976 | 6-0 | 198 | B | R | AAA | | Sebring High School (Sebring,FL) |
| 4 | 115 | June-Reg | J.D. Smart | | P | 21 | 11/12/1973 | 6-2 | 190 | R | R | MLB | 1999-2001 | University of Texas |
| 5 | 143 | June-Reg | Brian Schneider | | C | 18 | 11/26/1976 | 6-1 | 200 | L | R | MLB | 2000-2008 | Northampton High School (Northampton,PA) |
| 6 | 171 | June-Reg | Ronney Daniels | | OF-P | 18 | 9/17/1976 | 6-3 | 210 | R | L | A- | | Lake Wales High School (Lake Wales,FL) |
| 7 | 199 | June-Reg | Peter Fortune | | P | 20 | 3/4/1975 | 6-2 | 190 | L | L | A | | Rockland Community College |
| 8 | 227 | June-Reg | Trey Martin | | P | 18 | 10/2/1976 | 6-2 | 175 | R | R | A- | | Arcadia High School (Phoenix,AZ) |
| 9 | 255 | June-Reg | Bienvenido Sanchez | | P | 19 | 10/14/1975 | 6-1 | 185 | R | R | Rookie | | |
| 10 | 283** | June-Reg | Jeff Austin | | P | 18 | 10/19/1976 | 6-0 | 185 | R | R | MLB | 2001-2003 | Kingwood High School (Kingwood,TX) |
| 11 | 311 | June-Reg | Jimmy Turman | | P | 19 | 11/10/1975 | 6-0 | 210 | R | R | A+ | | Shelton State Community College |
| 12 | 339 | June-Reg | Rob Marquez | | p | 22 | 4/21/1973 | 6-0 | 200 | R | R | AAA | | McNeese State University |
| 13 | 367 | June-Reg | David Herr | | p | | | | | | | A- | | Villanova University |
| 14 | 395 | June-Reg | Tim Dixon | | p | 23 | 2/26/1972 | 6-2 | 215 | L | L | AAA | | California State University, Fullerton |
| 15 | 423 | June-Reg | D.C. Olsen | | 1B | 23 | 5/3/1972 | 6-0 | 220 | R | R | A | | California State University, Fullerton |
| 16 | 451 | June-Reg | Pete Laforest | | SS-3B | 17 | 1/27/1978 | 6-2 | 209 | L | R | MLB | 2003-2007 | |
| 17 | 479 | June-Reg | Wes Denning | | OF | | | 5-11 | 190 | L | R | A | | University of Minnesota |
| 18 | 507 | June-Reg | Tom Brady | | C | 17 | 8/3/1977 | 6-4 | 225 | | | - | | Junipero Serra High School (San Mateo,CA) |
| 19 | 535 | June-Reg | Jacob Steinkemper | | C | | | | | | | A- | | Arizona State University |
| 20 | 563 | June-Reg | Mike Bell | | p | 22 | 10/14/1972 | 6-2 | 195 | L | L | AA | | Florida State University |
| 21 | 591** | June-Reg | Stan Baston | | OF-3B | 18 | 2/12/1977 | 6-2 | 180 | R | R | A | | North Florida Christian High School (Tallahassee,FL) |
| 22 | 619 | June-Reg | Scott Mitchell | | p | 22 | 3/19/1973 | 6-0 | 185 | R | R | AAA | | University of the Pacific |
| 23 | 647 | June-Reg | Mo Blakeney | | OF | 22 | 1/17/1973 | 5-10 | 180 | R | R | A+ | | Elon University |
| 24 | 675 | June-Reg | Mike Wolger | | OF-p | 22 | 9/12/1972 | 6-1 | 215 | L | L | A+ | | University of California |
| 25 | 703 | June-Reg | Jaime Garcia | | C | | | | | | | A | | University of New Mexico |
| 26 | 731 | June-Reg | Ryan Van Oeveren | | SS | | | | | | | - | | University of Michigan |
| 27 | 759 | June-Reg | Noah Hall | | OF | 18 | 6/9/1977 | 5-11 | 200 | R | R | AAA | | Aptos High School (Aptos,CA) |
| 28 | 787 | June-Reg | Jarrett Shearin | | OF | | | | | | | A- | | Wake Forest-Rolesville High School (Wake Forest,NC) |
| 29 | 815 | June-Reg | Jeremiah Colson | | OF | | | | | | | Rookie | | St. Paul's High School (St. Paul's,NC) |
| 30 | 843 | June-Reg | James Lacey | | p | | | | | | | Rookie | | Coconut Creek High School (Coconut Creek,FL) |
| 31 | 871 | June-Reg | Toby McDermott | | p | 19 | 9/25/1975 | 6-2 | 200 | L | L | Rookie | | Tacoma Community College |
| 32 | 899 | June-Reg | Joe Kerrigan | | SS | 17 | 11/1/1977 | 5-10 | 180 | L | R | A+ | | Radnor High School (Radnor,PA) |
| 33 | 927 | June-Reg | Shawn Peterson | | C-Of | | | | | | | - | | Orem High School (Orem,UT) |
| 34 | 955 | June-Reg | Scott Porter | | p | 18 | 3/18/1977 | 6-1 | 195 | R | R | A+ | | Middleburg High School (Middleburg,FL) |
| 35 | 983** | June-Reg | Mitch Wylie | | p | 18 | 1/14/1977 | 6-3 | 190 | R | R | AAA | | North Scott High School (Eldridge,IA) |
| 36 | 1011 | June-Reg | Aaron Underwood | | p | 18 | 1/19/1977 | 6-3 | 200 | R | R | - | | Lehigh High School (Lehigh Acres,FL) |
| 37 | 1039** | June-Reg | Matthew Dehner | | 3B | 18 | 4/23/1977 | 6-4 | 205 | R | R | A | | El Dorado High School (Las Vegas,NV) |
| 38 | 1067 | June-Reg | Brandon Gadke | | Of | | | | | | | - | | Orange High School (Orange,OH) |
| 39 | 1095 | June-Reg | Bruno Vaillancourt | | p | | | | | | | - | | |
| 40 | 1123** | June-Reg | Shane Wright | | p | 18 | 10/28/1976 | 6-3 | 224 | R | R | A | | Hayden High School (Topeka,KS) |
| 41 | 1151 | June-Reg | Rob Everett | | p | 13 | 4/13/1982 | 6-0 | 190 | R | R | Rookie | | Lake City Community College |
| 42 | 1179 | June-Reg | Torrance Davis | | of | | | | | | | Rookie | | Liberty Eylau High School (Texarkana,TX) |
| 43 | 1207** | June-Reg | Jesse Crespo | | C | 17 | 9/18/1977 | 6-3 | 200 | R | R | Rookie | | |
| 44 | 1235 | June-Reg | Philip Derryman | | p | | | | | | | - | | Moorpark College |
| 45 | 1260 | June-Reg | Adam Huxhold | | p | 18 | 8/25/1976 | 6-1 | 175 | L | L | Rookie | | Lindbergh High School (Renton,WA) |
| 46 | 1284** | June-Reg | Danny Prata | | p | 16 | 9/13/1978 | 6-0 | 190 | L | L | A+ | | |
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