| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2006 | 18 | 527 | June-Reg | Chase Larsson ** | Kansas City Royals | OF | A | 2008-2012 | H | Kitsilano (Vancouver,BC) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 18 | 528 | June-Reg | Andrew Cashner ** | Colorado Rockies | P | MLB | 2006-2013 | C | Angelina College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 529 | June-Reg | Jay Brown | Tampa Bay Rays | P | NCAA | 2007-2010 | C | Young Harris College | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 530 | June-Reg | Francisco Ortiz | Pittsburgh Pirates | P | A | 2006-2010 | H | Puerto Rico Baseball Acad (Gurabo,PR) | SF | PR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 531 | June-Reg | Kam Mickolio | Seattle Mariners | P | MLB | 2005-2012 | C | Utah Valley State College | SF | UT | 1 | 0 | 0 | 0 | 0 | 0 | .000 | 0 | 3 | 4.83 | 0 | 32 | 33 | 0 |
| 2006 | 18 | 532 | June-Reg | Deik Scram | Detroit Tigers | CF | AAA | 2006-2011 | C | Oklahoma State University | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 533 | June-Reg | Joe Jones | Los Angeles Dodgers | P | A+ | 2004-2008 | C | University of Portland | SF | OR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 534 | June-Reg | Ryan Wehrle ** | Cincinnati Reds | SS | A- | 2005-2010 | C | University of Nebraska | SF | NE | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 535 | June-Reg | Nathan Nery | Baltimore Orioles | P | AA | 2004-2010 | C | Stetson University | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 536 | June-Reg | Jeff Stallings | San Francisco Giants | P | NCAA | 2004-2008 | C | North Carolina State University | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 537 | June-Reg | Brad Miller | Arizona Diamondbacks | 1B | A+ | 2003-2010 | C | Ball State University | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 538 | June-Reg | Michael Wagner | Texas Rangers | P | AAA | 2004-2007 | C | Washington State University | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 539 | June-Reg | Jose Hernandez | Chicago Cubs | P | - | H | Edgewater (Orlando,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 18 | 540 | June-Reg | Kyle Walter | Toronto Blue Jays | P | A- | 2003-2008 | C | Bucknell University | SF | PA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 541 | June-Reg | Adam Carr | Washington Nationals | P | AAA | 2005-2012 | C | Oklahoma State University | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 542 | June-Reg | Andrew Clark ** | Milwaukee Brewers | 1B | A+ | 2007-2012 | H | New Palestine (New Palestine,IN) | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 543 | June-Reg | Garner Wetzel | San Diego Padres | RF | A- | 2006-2006 | C | Millsaps College | SF | MS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 544 | June-Reg | Ritchie Price | New York Mets | SS | A- | 2003-2006 | C | University of Kansas | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 545 | June-Reg | Ross Liersemann | Florida Marlins | P | A+ | 2003-2007 | C | University of Akron | SF | OH | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 546 | June-Reg | Chris Anderson | Minnesota Twins | P | A | 2008-2009 | C | Northern Essex Community College | SF | MA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 547 | June-Reg | Michael Dubee | Philadelphia Phillies | P | AAA | 2006-2012 | C | Northwest Florida State College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 548 | June-Reg | Mike Ambort ** | Oakland Athletics | C | AA | 2004-2010 | C | Lamar University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 549 | June-Reg | Colt Adams | Houston Astros | P | A | 2006-2008 | C | Dixie State College of Utah | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 550 | June-Reg | J.B. Paxson ** | Atlanta Braves | C | A | 2007-2010 | C | Walters State Community College | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 551 | June-Reg | Daryl King | Cleveland Indians | LF | RK | 2006-2007 | H | Benicia (Benicia,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 552 | June-Reg | Charles Brewer ** | Los Angeles Angels | P | AAA | 2007-2013 | H | Chaparral (Scottsdale,AZ) | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 553 | June-Reg | Lars Anderson | Boston Red Sox | 1B | MLB | 2007-2013 | H | Jesuit (Carmichael,CA) | SF | CA | 48 | 1 | 0 | 0 | 4 | 0 | .167 | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 554 | June-Reg | Del Howell ** | New York Yankees | P | A | 2007-2011 | H | American Christian Academ (Tuscaloosa,AL) | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 18 | 555 | June-Reg | Lucas Luetge | Chicago White Sox | P | MLB | 2008-2013 | C | San Jacinto College | SF | TX | -- | -- | -- | -- | -- | -- | -- | 2 | 2 | 3.98 | 2 | 41 | 38 | 0 |
| 2006 | 18 | 556 | June-Reg | Amaury Cazana | St. Louis Cardinals | RF | AAA | 2006-2012 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |