| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2006 | 16 | 467 | June-Reg | Tyrone Wilson | Kansas City Royals | SS | RK | 2006-2009 | H | Southern (Durham,NC) | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 468 | June-Reg | Anthony Jackson | Colorado Rockies | CF | AA | 2005-2012 | C | Pacific | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 469 | June-Reg | Ryan Owen | Tampa Bay Rays | P | A+ | 2006-2008 | C | Cal State Dominguez Hills | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 470 | June-Reg | Kris Watts | Pittsburgh Pirates | C | AAA | 2005-2013 | C | Santa Clara University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 471 | June-Reg | Austin Bibens-Dirkx | Seattle Mariners | P | AAA | 2006-2013 | C | University of Portland | SF | OR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 472 | June-Reg | Jeff Gerbe | Detroit Tigers | P | AA | 2003-2009 | C | Michigan State University | SF | MI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 473 | June-Reg | Justin Coats ** | Los Angeles Dodgers | SS | - | H | Texas (Texarkana,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 16 | 474 | June-Reg | Jamie Arneson | Cincinnati Reds | P | A | 2005-2010 | C | Bakersfield College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 475 | June-Reg | Justin Johnson | Baltimore Orioles | C | A+ | 2006-2008 | C | University of Illinois-Chicago | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 476 | June-Reg | Paul Oseguera | San Francisco Giants | P | AA | 2005-2012 | C | UCLA | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 477 | June-Reg | Blake Sharpe | Arizona Diamondbacks | 2B | A+ | 2003-2007 | C | USC | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 478 | June-Reg | Cody Podraza | Texas Rangers | CF | A+ | 2006-2010 | H | Tomball (Tomball,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 479 | June-Reg | Blake Parker | Chicago Cubs | C | MLB | 2004-2013 | C | University of Arkansas | SF | AR | -- | -- | -- | -- | -- | -- | -- | 0 | 0 | 6.00 | 0 | 6 | 6 | 0 |
| 2006 | 16 | 480 | June-Reg | Chase Lirette | Toronto Blue Jays | P | A | 2004-2009 | C | University of South Florida | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 481 | June-Reg | Patrick Nichols | Washington Nationals | C | AAA | 2003-2008 | C | Old Dominion University | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 482 | June-Reg | Richard Seidel | Milwaukee Brewers | P | AAA | 2007-2013 | H | La Crosse Central (La Crosse,WI) | SF | WI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 483 | June-Reg | Ray Stokes | San Diego Padres | 2B | A | 2006-2011 | C | Cal State East Bay | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 484 | June-Reg | Tobi Stoner | New York Mets | P | MLB | 2005-2012 | C | Davis and Elkins College | SF | WV | -- | -- | -- | -- | -- | -- | -- | 0 | 1 | 3.97 | 0 | 11 | 5 | 0 |
| 2006 | 16 | 485 | June-Reg | Jake Blackwood | Florida Marlins | 3B | AA | 2006-2013 | C | Maple Woods Community College | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 486 | June-Reg | Shayne Willson | Minnesota Twins | RF | NCAA | 2009-2010 | H | Earl Marriott Secondary (Surrey,BC) | SF | BC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 487 | June-Reg | Cody Montgomery | Philadelphia Phillies | 3B | A- | 2006-2007 | C | Dallas Baptist University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 488 | June-Reg | Brandon Dewing | Oakland Athletics | P | A+ | 2003-2008 | C | San Jose State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 489 | June-Reg | Andrew Holder | Houston Astros | CF | A | 2006-2009 | C | Dallas Baptist University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 490 | June-Reg | Jack Tilghman | Atlanta Braves | P | A+ | 2007-2010 | C | Walters State Community College | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 491 | June-Reg | Stephen Douglas | Cleveland Indians | CF | AAA | 2004-2012 | C | East Tennessee State University | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 492 | June-Reg | Scott Carroll ** | Los Angeles Angels | P | AAA | 2006-2012 | C | Missouri State University | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 493 | June-Reg | Ty Weeden | Boston Red Sox | C | A+ | 2007-2010 | H | Edmond Santa Fe (Edmond,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 494 | June-Reg | Paul Patterson | New York Yankees | P | A | 2006-2010 | C | Northern Kentucky University | SF | KY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2006 | 16 | 495 | June-Reg | Jose Jimenez | Chicago White Sox | 3B | - | H | Monsignor Pace (Miami,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2006 | 16 | 496 | June-Reg | Thomas Pham | St. Louis Cardinals | SS | AA | 2006-2013 | H | Durango (Las Vegas,NV) | SF | NV | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |