| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2003 | 4 | 98 | June-Reg | Travis Schlichting | Tampa Bay Rays | 3B | MLB | 2003-2011 | H | Round Rock (Round Rock,TX) | SF | TX | 1 | 0 | 0 | 0 | 0 | 0 | .000 | 1 | 0 | 3.55 | 0 | 25 | 16 | 0 |
| 2003 | 4 | 99 | June-Reg | Charlie Fermaint | Milwaukee Brewers | OF | AA | 2003-2009 | H | Jose S Allegria (Dorado,PR) | SF | PR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 100 | June-Reg | Josh Rainwater | Detroit Tigers | P | AAA | 2003-2012 | H | DeRidder (DeRidder,LA) | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 101 | June-Reg | Peter Stonard | San Diego Padres | SS | A+ | 2002-2003 | C | San Diego State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 102 | June-Reg | Miguel Vega | Kansas City Royals | 3B | A+ | 2003-2008 | H | Northside Christian (St. Petersburg,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 103 | June-Reg | Tony Richie | Chicago Cubs | C | AAA | 2001-2008 | C | Florida State University | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 104 | June-Reg | Bob McCrory | Baltimore Orioles | P | MLB | 2001-2010 | C | University of Southern Mississippi | SF | MS | -- | -- | -- | -- | -- | -- | -- | 0 | 0 | 16.46 | 0 | 14 | 9 | 0 |
| 2003 | 4 | 105 | June-Reg | Kyle Pearson | Pittsburgh Pirates | P | AA | 2003-2008 | H | Mosley (Panama City,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 106 | June-Reg | Wes Littleton | Texas Rangers | P | MLB | 2001-2012 | C | Cal State Fullerton | SF | CA | 1 | 0 | 0 | 0 | 0 | 0 | .000 | 5 | 3 | 3.69 | 3 | 102 | 55 | 0 |
| 2003 | 4 | 107 | June-Reg | Rick Guarno | Colorado Rockies | C | AAA | 2002-2009 | C | University of Arkansas-Little Rock | SF | AR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 108 | June-Reg | Ben Harrison ** | Cleveland Indians | OF | AAA | 2001-2012 | C | University of Florida | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 109 | June-Reg | Shane Hawk | New York Mets | P | A+ | 2001-2004 | C | Oklahoma State University | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 110 | June-Reg | Kurt Isenberg | Toronto Blue Jays | P | AA | 2001-2008 | C | James Madison University | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 111 | June-Reg | Kenny Lewis | Cincinnati Reds | OF | AA | 2003-2005 | H | Washington (Danville,VA) | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 112 | June-Reg | Robert Valido | Chicago White Sox | SS | AAA | 2003-2009 | H | Coral Park (Miami,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 113 | June-Reg | Jai Miller | Florida Marlins | OF | MLB | 2003-2012 | H | Selma (Selma,AL) | SF | AL | 68 | 3 | 0 | 2 | 6 | 1 | .235 | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 114 | June-Reg | Jonathan Papelbon | Boston Red Sox | P | MLB | 2002-2013 | C | Mississippi State University | SF | MS | -- | -- | -- | -- | -- | -- | -- | 28 | 25 | 2.34 | 257 | 499 | 601 | 3 |
| 2003 | 4 | 115 | June-Reg | Michael Bourn | Philadelphia Phillies | OF | MLB | 2001-2013 | C | University of Houston | SF | TX | 3015 | 125 | 45 | 22 | 215 | 276 | .272 | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 116 | June-Reg | Paul Fagan | Seattle Mariners | P | A+ | 2003-2012 | H | Bartram Trail (Jacksonville,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 117 | June-Reg | Edgardo Baez | Montreal Expos | OF | AAA | 2003-2012 | H | Jose S Allegria (Dorado,PR) | SF | PR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 118 | June-Reg | David Shinskie | Minnesota Twins | P | AA | 2003-2009 | H | Mount Carmel Area (Mount Carmel,PA) | SF | PA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 119 | June-Reg | Josh Anderson | Houston Astros | OF | MLB | 2002-2010 | C | Eastern Kentucky University | SF | KY | 486 | 17 | 5 | 4 | 47 | 36 | .272 | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 120 | June-Reg | Bob Zimmermann | Anaheim Angels | P | AA | 2001-2012 | C | Missouri State University | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 121 | June-Reg | Xavier Paul | Los Angeles Dodgers | OF | MLB | 2003-2013 | H | Slidell (Slidell,LA) | SF | LA | 464 | 20 | 7 | 5 | 39 | 23 | .259 | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 122 | June-Reg | Eddie Kim | Oakland Athletics | 1B | A | 2001-2008 | C | James Madison University | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 123 | June-Reg | Brooks McNiven | San Francisco Giants | P | AAA | 2003-2009 | C | University of British Columbia | SF | BC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 124 | June-Reg | Steven White | New York Yankees | P | AAA | 2000-2008 | C | Baylor University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 125 | June-Reg | Mark Michael | St. Louis Cardinals | P | A+ | 2002-2006 | C | University of Delaware | SF | DE | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 126 | June-Reg | Chris Kinsey | Arizona Diamondbacks | P | AAA | 2002-2008 | C | Sacramento State | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2003 | 4 | 127 | June-Reg | Jamie Romak | Atlanta Braves | 1B | AAA | 2003-2013 | H | A.B. Lucas (London,ON) | SF | ON | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |