| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 2001 | 1 | 10 | June-Reg | Chris Burke | Houston Astros | IF | MLB | 2001-2010 | C | University of Tennessee | SF | TN | 1267 | 71 | 6 | 23 | 111 | 40 | .239 | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 2 | 54 | June-Reg | Mike Rodriguez | Houston Astros | OF | AAA | 1999-2009 | C | University of Miami | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 3 | 86 | June-Reg | Kirk Saarloos | Houston Astros | P | MLB | 1998-2009 | C | Cal State Fullerton | SF | CA | 41 | 2 | 0 | 0 | 5 | 0 | .073 | 29 | 30 | 5.02 | 2 | 509 | 251 | 73 |
| 2001 | 4 | 116 | June-Reg | Philip Barzilla | Houston Astros | P | MLB | 2000-2010 | C | Rice University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 5 | 146 | June-Reg | Charlton Jimerson | Houston Astros | OF | MLB | 1998-2010 | C | University of Miami | SF | FL | 9 | 0 | 0 | 2 | 2 | 4 | .444 | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 6 | 176 | June-Reg | Russ Rohlicek | Houston Astros | P | AAA | 2001-2006 | C | Long Beach State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 7 | 206 | June-Reg | Ryan Stegall | Houston Astros | IF | AAA | 2000-2004 | C | University of Missouri | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 8 | 236 | June-Reg | Brooks Conrad | Houston Astros | IF | MLB | 1999-2012 | C | Arizona State University | SF | AZ | 430 | 23 | 3 | 18 | 71 | 7 | .207 | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 9 | 266 | June-Reg | Kerry Hodges | Houston Astros | OF | AA | 2001-2002 | C | Texas Tech University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 10 | 296 | June-Reg | Lance Cormier ** | Houston Astros | P | MLB | 1999-2011 | C | University of Alabama | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 11 | 326 | June-Reg | D.J. Houlton | Houston Astros | P | MLB | 2001-2012 | C | Pacific | SF | CA | 30 | 1 | 0 | 0 | 1 | 0 | .100 | 6 | 11 | 4.99 | 0 | 157 | 111 | 19 |
| 2001 | 12 | 356 | June-Reg | Chris Little | Houston Astros | P | A- | 2001-2011 | C | St. Martin's University | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 13 | 386 | June-Reg | Kendall Jones | Houston Astros | C | A- | 2001-2002 | C | Texarkana College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 14 | 416 | June-Reg | Clint Hoover | Houston Astros | IF | A- | 1998-2002 | C | University of California | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 15 | 446 | June-Reg | Trevor Mote | Houston Astros | IF | A+ | 2000-2003 | C | Baylor University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 16 | 476 | June-Reg | Brian Rodaway | Houston Astros | P | A+ | 1999-2008 | C | University of Nebraska | SF | NE | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 17 | 506 | June-Reg | Tom Bayrer | Houston Astros | P | A | 2001-2002 | C | Campbell University | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 18 | 536 | June-Reg | Joey DeLeon | Houston Astros | P | A | 2001-2004 | H | Nixon-Smiley (Nixon,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 19 | 566 | June-Reg | Ryan Kochen | Houston Astros | IF | A+ | 2000-2005 | C | ?? | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 20 | 596 | June-Reg | Mark Obradovich | Houston Astros | C | AA | 2001-2005 | C | Gadsden State Community College | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 21 | 626 | June-Reg | Jeff Derrickson | Houston Astros | C | - | H | Bryan Station (Lexington,KY) | SF | KY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 22 | 656 | June-Reg | Justin Humphries | Houston Astros | C | A+ | 2001-2009 | H | Episcopal (Bellaire,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 23 | 686 | June-Reg | Matt Albers | Houston Astros | P | MLB | 2002-2013 | H | Clements School (Sugar Land,TX) | SF | TX | 34 | 0 | 0 | 0 | 0 | 0 | .059 | 22 | 30 | 4.68 | 0 | 442 | 318 | 23 |
| 2001 | 24 | 716 | June-Reg | Cameron Likely | Houston Astros | OF | A+ | 2001-2004 | C | University of South Alabama | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 25 | 746 | June-Reg | Chad Durham | Houston Astros | P | A- | 1998-2001 | C | Texas Christian University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 26 | 776 | June-Reg | Steven Checksfield | Houston Astros | OF | A+ | 2001-2005 | H | Kingston (Kingston,NY) | SF | NY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 27 | 806 | June-Reg | Henry Colbert | Houston Astros | P | A- | 2003-2004 | C | Columbia Basin College | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 28 | 836 | June-Reg | Seth Bobbitt | Houston Astros | P | AA | 2001-2005 | C | Birmingham-Southern College | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 29 | 866 | June-Reg | Raymar Diaz ** | Houston Astros | OF | A+ | 2003-2012 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 30 | 896 | June-Reg | Jjallil Sandoval | Houston Astros | IF | A- | 2001-2007 | C | Cal State Los Angeles | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 31 | 926 | June-Reg | Brian Middleton | Houston Astros | P | A | 2001-2001 | C | West Virginia State University | SF | WV | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 32 | 956 | June-Reg | Billy Jacobson | Houston Astros | RK | 1998-2001 | C | Rice University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 33 | 986 | June-Reg | John Fagan | Houston Astros | IF | AA | 2000-2006 | C | San Jose State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 34 | 1016 | June-Reg | Brandon Macchi | Houston Astros | OF | A- | 2000-2003 | C | San Jose State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 35 | 1046 | June-Reg | Travis Teeter | Houston Astros | P | A+ | 2002-2005 | C | Rensselaer Polytechnic Institute | SF | NY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 36 | 1076 | June-Reg | Andrew Perry | Houston Astros | P | A- | 2001-2001 | C | Cal Poly | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 37 | 1106 | June-Reg | Jared Gothreaux ** | Houston Astros | P | AAA | 1999-2010 | C | McNeese State University | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 38 | 1136 | June-Reg | Ryan McKeller ** | Houston Astros | P | AAA | 2003-2012 | H | Pflugerville (Pflugerville,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 39 | 1166 | June-Reg | Paul Hazeres | Houston Astros | P | - | H | Carolina Forest (Myrtle Beach,SC) | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 40 | 1196 | June-Reg | Osvaldo Diaz | Houston Astros | P-3B | RK | 2005-2007 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 41 | 1225 | June-Reg | Christopher Saywers | Houston Astros | P-SS | - | C | Edmonds Community College | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 42 | 1254 | June-Reg | Patrick Wells | Houston Astros | P | Ind | 2004-2007 | H | West Jordan (West Jordan,UT) | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 43 | 1282 | June-Reg | Pat McNair | Houston Astros | P | A | 1998-2002 | C | Virginia Commonwealth University | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 44 | 1310 | June-Reg | Lance Dawkins ** | Houston Astros | SS | A- | 2003-2004 | C | Meridian Community College | SF | MS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 45 | 1338 | June-Reg | Kyle Thompson ** | Houston Astros | P | - | H | Valley Center (Escondido,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 46 | 1366 | June-Reg | Justin Ard | Houston Astros | RF | - | H | Clear Lake (Houston,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 47 | 1394 | June-Reg | Eric Turnbow | Houston Astros | SS | - | H | Jordan (Sandy,UT) | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 2001 | 48 | 1421 | June-Reg | Ben Leuthard | Houston Astros | P | NCAA | 1999-2003 | C | San Diego State University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 2001 | 49 | 1446 | June-Reg | Kevin House ** | Houston Astros | OF | A- | 2003-2010 | C | Alabama Southern Community College | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |