| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1999 | 1 | 12 | June-Reg | Brett Myers | Philadelphia Phillies | P | MLB | 1999-2013 | C | Jacksonville University | SF | FL | 471 | 11 | 0 | 0 | 12 | 0 | .134 | 97 | 93 | 4.20 | 40 | 1689 | 1367 | 249 |
| 1999 | 2 | 63 | June-Reg | Jason Cooper ** | Philadelphia Phillies | H | AAA | 2000-2011 | H | Moses Lake (Moses Lake,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 3 | 96 | June-Reg | Russ Jacobson | Philadelphia Phillies | C | AAA | 1998-2005 | C | University of Miami | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 4 | 126 | June-Reg | Brad Pautz | Philadelphia Phillies | P | AA | 1999-2003 | C | University of Minnesota | SF | MN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 5 | 156 | June-Reg | Joe Saunders ** | Philadelphia Phillies | P | MLB | 2002-2013 | H | West Springfield (Springfield,VA) | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 186 | June-Reg | Daniel Tosca | Philadelphia Phillies | C | A+ | 1999-2004 | H | Durant (Plant City,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 7 | 216 | June-Reg | Dave Gil ** | Philadelphia Phillies | P | AAA | 1997-2008 | C | University of Miami | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 8 | 246 | June-Reg | Jesse Thrasher | Philadelphia Phillies | P | RK | 1999-2004 | H | Benton (St. Joseph,MO) | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 9 | 276 | June-Reg | Julio Collazo | Philadelphia Phillies | SS | A | 1999-2001 | C | Mississippi Delta Community College | SF | MS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 10 | 306 | June-Reg | Marlon Byrd | Philadelphia Phillies | OF | MLB | 1999-2013 | C | Georgia Perimeter College | SF | GA | 3835 | 217 | 27 | 82 | 445 | 49 | .278 | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 11 | 336 | June-Reg | Richard Legette | Philadelphia Phillies | P | RK | 1999-2000 | H | Stratford (Goose Creek,SC) | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 12 | 366 | June-Reg | Brian Bush | Philadelphia Phillies | OF | A+ | 1996-2002 | C | University of Texas-San Antonio | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 13 | 396 | June-Reg | Frank Brooks | Philadelphia Phillies | P | MLB | 1999-2008 | C | Saint Peter's College | SF | NJ | 1 | 0 | 0 | 0 | 0 | 0 | .000 | 0 | 1 | 4.58 | 0 | 18 | 18 | 1 |
| 1999 | 14 | 426 | June-Reg | Jovanathan Clark | Philadelphia Phillies | LF | - | H | Vallejo (Vallejo,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 15 | 456 | June-Reg | Mark Outlaw | Philadelphia Phillies | P | AA | 1996-2003 | C | Baylor University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 16 | 486 | June-Reg | Chris Keelin | Philadelphia Phillies | P | AA | 1999-2004 | C | Montclair State University | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 17 | 516 | June-Reg | Brad Tucker | Philadelphia Phillies | P | A- | 1996-2000 | C | Pepperdine University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 18 | 546 | June-Reg | Rob Avila | Philadelphia Phillies | C | AA | 1999-2003 | C | Master's College, The | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 19 | 576 | June-Reg | Thomas Saye ** | Philadelphia Phillies | P | RK | 2000-2000 | H | Newberry (Newberry,SC) | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 20 | 606 | June-Reg | Hector Serrano | Philadelphia Phillies | C | RK | 1999-1999 | H | Juan Ponce De Leon (Sabana Hoyos,PR) | SF | PR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 21 | 636 | June-Reg | Aaron Merhoff | Philadelphia Phillies | LF | A+ | 1999-2000 | C | Texas Lutheran University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 22 | 666 | June-Reg | Justin Duarte | Philadelphia Phillies | C | AA | 1999-2002 | C | Azusa Pacific University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 23 | 696 | June-Reg | Todd Eagle | Philadelphia Phillies | C | RK | 1999-1999 | H | Albany (Albany,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 24 | 726 | June-Reg | Joseph Schley | Philadelphia Phillies | CF | A- | 1999-1999 | C | Southern Illinois University | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 25 | 756 | June-Reg | Brian Hitchcox | Philadelphia Phillies | SS | AAA | 1997-2005 | C | Samford University | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 26 | 786 | June-Reg | Justin Fry | Philadelphia Phillies | P | A+ | 1996-2009 | C | Ohio State University | SF | OH | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 27 | 816 | June-Reg | Dan O'Neill | Philadelphia Phillies | AAA | 1988-2000 | C | University of Illinois | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 28 | 846 | June-Reg | Tom Batson | Philadelphia Phillies | 3B | AA | 1999-2001 | C | Northwestern State University | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 29 | 876 | June-Reg | Randon Ho | Philadelphia Phillies | P | NCAA | 1997-2000 | C | University of Hawaii | SF | HI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 30 | 906 | June-Reg | Chad Smith | Philadelphia Phillies | P | A- | 1999-1999 | C | Indiana University | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 31 | 936 | June-Reg | Wade Van Vark | Philadelphia Phillies | CF | RK | 1999-1999 | C | Central College | SF | IA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 32 | 966 | June-Reg | Jay Sitzman | Philadelphia Phillies | OF | AA | 1998-2005 | C | Arizona State University | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 33 | 996 | June-Reg | Dean Muthig | Philadelphia Phillies | 3B | A- | 1999-2000 | C | Carthage College | SF | WI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 34 | 1026 | June-Reg | Charles Carey | Philadelphia Phillies | P | - | C | Cuesta College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 35 | 1056 | June-Reg | Chris Herman | Philadelphia Phillies | SS | - | C | Mount San Antonio College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 36 | 1086 | June-Reg | Todd Simo | Philadelphia Phillies | NCAA | 2000-2002 | H | New Providence (New Providence,NJ) | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 37 | 1116 | June-Reg | Ryan Brookman | Philadelphia Phillies | P | A | 1999-2000 | C | University of Wisconsin | SF | WI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 38 | 1146 | June-Reg | Jon Uhl ** | Philadelphia Phillies | P | A | 2002-2005 | H | Leto (Tampa,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 39 | 1176 | June-Reg | Kameron Loe ** | Philadelphia Phillies | P | MLB | 2002-2013 | H | Granada Hills (Granada Hills,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 40 | 1206 | June-Reg | Lawrence Alexander | Philadelphia Phillies | OF | RK | 2000-2001 | H | Chandler (Chandler,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 41 | 1236 | June-Reg | Todd Oetting | Philadelphia Phillies | C | RK | 2000-2005 | H | Jefferson City (Jefferson City,MO) | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 42 | 1264 | June-Reg | Erick Rivera | Philadelphia Phillies | OF | A+ | 1999-2002 | H | Luis Munoz Marin (Anasco,PR) | SF | PR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 43 | 1291 | June-Reg | Nicholas White | Philadelphia Phillies | P | - | H | Arapahoe (Littleton,CO) | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 44 | 1318 | June-Reg | Jordan Pickens ** | Philadelphia Phillies | 1B | A+ | 2001-2005 | H | Atascadero (Atascadero,CA) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |