| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1999 | 1 | 16 | June-Reg | Jason Jennings | Colorado Rockies | P | MLB | 1997-2011 | C | Baylor University | SF | TX | 329 | 14 | 0 | 2 | 26 | 0 | .207 | 62 | 74 | 4.95 | 1 | 1128 | 749 | 180 |
| 1999 | 2 | 67 | June-Reg | Ryan Kibler | Colorado Rockies | P | AA | 1999-2002 | H | King (Tampa,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 3 | 100 | June-Reg | Josh Bard | Colorado Rockies | C | MLB | 1997-2012 | C | Texas Tech University | SF | TX | 1778 | 109 | 3 | 39 | 220 | 1 | .254 | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 4 | 130 | June-Reg | Chuck Crowder | Colorado Rockies | P | AA | 1996-2002 | C | Georgia Tech | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 5 | 160 | June-Reg | Chris Testa | Colorado Rockies | OF | A+ | 1999-2007 | H | Palmdale (Palmdale,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 190 | June-Reg | Roney Johnson | Colorado Rockies | P | RK | 1999-1999 | H | Woodcreek (Roseville,CA) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 7 | 220 | June-Reg | Carlos Figueroa | Colorado Rockies | P | A | 1999-2001 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 8 | 250 | June-Reg | Greg Catalanotte | Colorado Rockies | OF | AA | 1998-2004 | C | University of Florida | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 9 | 280 | June-Reg | Colin Young | Colorado Rockies | P | AA | 1999-2007 | C | Fordham University | SF | NY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 10 | 310 | June-Reg | Sean Daly | Colorado Rockies | C | RK | 1999-1999 | H | Golden West (Visalia,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 11 | 340 | June-Reg | Chris Moore | Colorado Rockies | IF | A+ | 1996-2002 | C | Western Carolina University | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 12 | 370 | June-Reg | Craig House | Colorado Rockies | P | MLB | 1999-2005 | C | University of Memphis | SF | TN | -- | -- | -- | -- | -- | -- | -- | 1 | 1 | 7.24 | 0 | 14 | 8 | 0 |
| 1999 | 13 | 400 | June-Reg | Rick Cercy | Colorado Rockies | P | AA | 1999-2003 | C | Morehead State University | SF | KY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 14 | 430 | June-Reg | Eric McQueen | Colorado Rockies | C | A+ | 1996-2001 | C | Georgia Tech | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 15 | 460 | June-Reg | Dan Phillips | Colorado Rockies | OF | AA | 1997-2004 | C | Cal State Northridge | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 16 | 490 | June-Reg | Cam Esslinger | Colorado Rockies | P | AAA | 1999-2005 | C | Seton Hall University | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 17 | 520 | June-Reg | Billy Gasparino | Colorado Rockies | SS | A- | 1996-1999 | C | Oklahoma State University | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 18 | 550 | June-Reg | Brandon Caraway ** | Colorado Rockies | OF | A+ | 1997-2003 | C | University of Houston | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 19 | 580 | June-Reg | David Mulqueen | Colorado Rockies | 3B | A- | 1999-2001 | H | Marquette University (Milwaukee,WI) | SF | WI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 20 | 610 | June-Reg | Chris Warren | Colorado Rockies | IF | AA | 1999-2003 | C | Howard College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 21 | 640 | June-Reg | Matt Hoffman | Colorado Rockies | P | A- | 1999-2000 | C | Oral Roberts University | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 22 | 670 | June-Reg | Darin Naatjes ** | Colorado Rockies | P | A- | 2000-2005 | H | West Lyon (Alvord,IA) | SF | IA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 23 | 700 | June-Reg | Javier Lorenzo | Colorado Rockies | P | A | 1999-2003 | C | Miami-Dade College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 24 | 730 | June-Reg | Deryck Christensen | Colorado Rockies | P | RK | 1999-2000 | H | Eastside Catholic (Bellevue,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 25 | 760 | June-Reg | Ray Aguilar | Colorado Rockies | P | AAA | 2001-2006 | C | Cypress College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 26 | 790 | June-Reg | Bobby Brownlie ** | Colorado Rockies | AAA | 2000-2009 | H | Edison (Edison,NJ) | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 27 | 820 | June-Reg | Mike Tejada | Colorado Rockies | C | AA | 2000-2003 | C | Brigham Young University | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 28 | 850 | June-Reg | Justin Hampson | Colorado Rockies | P | MLB | 2000-2013 | C | Southwestern Illinois College | SF | IL | 9 | 0 | 0 | 0 | 0 | 0 | .000 | 5 | 4 | 3.23 | 0 | 106 | 66 | 1 |
| 1999 | 29 | 880 | June-Reg | Bryce Coppieters | Colorado Rockies | NCAA | 2001-2001 | C | Lethbridge Community College | SF | AB | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 30 | 910 | June-Reg | Richard Sander ** | Colorado Rockies | P | A+ | 1977-2006 | C | Riverside Community College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 31 | 940 | June-Reg | Andy Warren ** | Colorado Rockies | P | A | 2001-2002 | C | Sam Houston State University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 32 | 970 | June-Reg | Casey Kelly | Colorado Rockies | 1B | - | H | Westview (Portland,OR) | SF | OR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 33 | 1000 | June-Reg | Darren Clarke ** | Colorado Rockies | P | MLB | 2000-2008 | H | Plant (Tampa,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 35 | 1060 | June-Reg | Don Tolen | Colorado Rockies | NCAA | 2000-2000 | H | Orange Glen (Escondido,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 36 | 1090 | June-Reg | Tom MacLane ** | Colorado Rockies | P | A | 2002-2004 | C | St. Petersburg College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 37 | 1120 | June-Reg | Chad Liter ** | Colorado Rockies | NCAA | 2003-2004 | H | Madison Consolidated (Madison,IN) | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 38 | 1150 | June-Reg | Jason Kramer ** | Colorado Rockies | NCAA | 2002-2002 | H | Marcus (Flower Mound,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 39 | 1180 | June-Reg | Billy Dennis ** | Colorado Rockies | OF | RK | 2002-2003 | H | Devine (Big Foot,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 40 | 1210 | June-Reg | Nicholas Gor ** | Colorado Rockies | P | A+ | 2004-2004 | H | Esperanza (Anaheim,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 41 | 1240 | June-Reg | Eli Lapka | Colorado Rockies | NCAA | 2003-2003 | H | Dodge City (Dodge City,KS) | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 42 | 1268 | June-Reg | Grant Mullen ** | Colorado Rockies | 1B | - | H | St. Christopher (Sarnia,ON) | SF | ON | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 43 | 1295 | June-Reg | Cortney Inman | Colorado Rockies | P | - | H | Parkview (Springfield,MO) | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 44 | 1322 | June-Reg | Nicholas Loughren | Colorado Rockies | P | - | H | Bishop Verot (Fort Myers,FL) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | ||
| 1999 | 45 | 1347 | June-Reg | Nick McCurdy ** | Colorado Rockies | P | AAA | 2001-2010 | C | Jefferson Davis Community College | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 46 | 1371 | June-Reg | T.J. Bird | Colorado Rockies | OF | A | 2000-2002 | C | Mendocino College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1395 | June-Reg | Kendall Jones ** | Colorado Rockies | C | A- | 2001-2002 | H | Broken Arrow (Broken Arrow,OK) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 48 | 1419 | June-Reg | Manases Pabon | Colorado Rockies | CF | - | C | Indian Hills Community College-Centerville | SF | IA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 49 | 1442 | June-Reg | Billy Wheeler ** | Colorado Rockies | P | A- | 2003-2003 | H | Crown Point (Crown Point,IN) | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |