| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1999 | 47 | 1383 | June-Reg | Chadd Blasko ** | Tampa Bay Rays | AAA | 2000-2007 | H | Mishawaka (Mishawaka,IN) | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1384 | June-Reg | Jacob Robertson | Florida Marlins | CF | - | H | Twin Falls (Twin Falls,ID) | SF | ID | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1385 | June-Reg | Christopher Jorgenson | Arizona Diamondbacks | OF | RK | 1999-1999 | H | McCoy (Medicine Hat,AB) | SF | AB | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1386 | June-Reg | Luke Field ** | Minnesota Twins | P | AA | 2000-2002 | C | Barton County Community College | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1387 | June-Reg | Matt Romero | Montreal Expos | CF | - | C | Utah Valley State College | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1388 | June-Reg | Greg Bauer ** | Kansas City Royals | P | AA | 2000-2005 | C | Wichita State University | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1389 | June-Reg | Bryce Morrison | Pittsburgh Pirates | Ind | 2002-2007 | H | Leander (Leander,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1390 | June-Reg | Ryan Warpinski ** | Milwaukee Brewers | P | A+ | 2000-2005 | H | Denmark (Maribel,WI) | SF | WI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1391 | June-Reg | Jared Cudd | Seattle Mariners | P | - | H | Sentinel (Sentinel,OK) | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1392 | June-Reg | Judd Richardson ** | Baltimore Orioles | P | A | 2001-2003 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1393 | June-Reg | Leon Smith | Cincinnati Reds | RF | - | H | Greenbrier (Evans,GA) | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1394 | June-Reg | Carlynn Steele | Chicago White Sox | SS | - | C | Connors State College | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1395 | June-Reg | Kendall Jones ** | Colorado Rockies | C | A- | 2001-2002 | H | Broken Arrow (Broken Arrow,OK) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1396 | June-Reg | Adam Thomas | Anaheim Angels | P | AAA | 2000-2012 | C | St. Petersburg College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1397 | June-Reg | Garris Gonce ** | Toronto Blue Jays | OF | A- | 2001-2002 | C | Florida State College at Jacksonville | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1398 | June-Reg | Joey Black | Los Angeles Dodgers | P | - | H | Bonneville (Ogden,UT) | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1399 | June-Reg | Martin Hayes | Texas Rangers | P | - | C | University of San Diego | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1400 | June-Reg | Andre Decordova | New York Mets | NCAA | 2002-2002 | H | Monsignor Pace (Miami,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1401 | June-Reg | Samuel Button | Cleveland Indians | P | A | 1999-2000 | C | Jacksonville State University | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 47 | 1402 | June-Reg | Oscar Vargas | San Francisco Giants | Ind | 2003-2005 | C | Chabot College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1403 | June-Reg | James Burgess | Boston Red Sox | NCAA | 2000-2003 | H | Durango (Las Vegas,NV) | SF | NV | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1404 | June-Reg | Dale Thayer | Chicago Cubs | P | MLB | 2000-2013 | H | Edison (Huntington Beach,CA) | SF | CA | 1 | 0 | 0 | 0 | 0 | 0 | .000 | 2 | 5 | 4.20 | 8 | 84 | 62 | 0 |
| 1999 | 47 | 1405 | June-Reg | John Perry | New York Yankees | 1B | - | H | Arapahoe (Littleton,CO) | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 47 | 1406 | June-Reg | Jimmy Anderson ** | Atlanta Braves | AA | 2000-2004 | H | Riverside North (Riverside,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |