| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1999 | 6 | 175 | June-Reg | Eric Henderson ** | Tampa Bay Rays | P | A+ | 2000-2004 | C | Santa Fe Community College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 176 | June-Reg | Charlie Frazier | Florida Marlins | OF | AA | 1999-2004 | H | Toms River South (Toms River,NJ) | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 177 | June-Reg | Brant Ust | Detroit Tigers | IF | AAA | 1997-2007 | C | University of Notre Dame | SF | IN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 178 | June-Reg | Justin Maureau ** | Arizona Diamondbacks | P | A+ | 2002-2004 | H | Highlands Ranch (Highlands Ranch,CO) | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 179 | June-Reg | Brian Wolfe | Minnesota Twins | P | MLB | 1999-2012 | H | Servite (Anaheim,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | 5 | 5 | 3.81 | 0 | 83 | 47 | 0 |
| 1999 | 6 | 180 | June-Reg | Dominick Ambrosini | Montreal Expos | IF | AA | 1999-2008 | H | Connetquot (Bohemia,NY) | SF | NY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 181 | June-Reg | Ryan Baerlocher | Kansas City Royals | P | AAA | 1998-2007 | C | Lewis and Clark College | SF | OR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 182 | June-Reg | B.J. Barns | Pittsburgh Pirates | OF | AA | 1999-2003 | C | Duquesne University | SF | PA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 183 | June-Reg | Mario Ramos | Oakland Athletics | P | MLB | 1998-2007 | C | Rice University | SF | TX | 1 | 0 | 0 | 0 | 0 | 0 | .000 | 1 | 1 | 6.23 | 0 | 13 | 8 | 3 |
| 1999 | 6 | 184 | June-Reg | Mark Ernster | Milwaukee Brewers | SS | AA | 1997-2003 | C | Arizona State University | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 185 | June-Reg | J.J. Putz | Seattle Mariners | P | MLB | 1999-2013 | C | University of Texas-San Antonio | SF | TX | -- | -- | -- | -- | -- | -- | -- | 33 | 31 | 3.04 | 183 | 519 | 547 | 0 |
| 1999 | 6 | 186 | June-Reg | Daniel Tosca | Philadelphia Phillies | C | A+ | 1999-2004 | H | Durant (Plant City,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 187 | June-Reg | Erik Bedard | Baltimore Orioles | P | MLB | 1999-2013 | C | Norwalk Community College | SF | CT | 57 | 1 | 0 | 0 | 1 | 0 | .158 | 63 | 64 | 3.85 | 0 | 1077 | 1044 | 189 |
| 1999 | 6 | 188 | June-Reg | Alex Leflore | Cincinnati Reds | CF | RK | 1999-2001 | H | Pinellas Park (Pinellas Park,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 189 | June-Reg | Dave Sanders ** | Chicago White Sox | P | MLB | 1999-2005 | C | Barton County Community College | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 190 | June-Reg | Roney Johnson | Colorado Rockies | P | RK | 1999-1999 | H | Woodcreek (Roseville,CA) | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1999 | 6 | 191 | June-Reg | Dusty Bergman | Anaheim Angels | P | MLB | 1997-2008 | C | University of Hawaii | SF | HI | -- | -- | -- | -- | -- | -- | -- | 0 | 0 | 13.50 | 0 | 2 | 1 | 0 |
| 1999 | 6 | 192 | June-Reg | Josh Teekel | St. Louis Cardinals | P | A+ | 1999-2005 | H | Belaire (Baton Rouge,LA) | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 193 | June-Reg | D.J. Hanson | Toronto Blue Jays | P | A | 1999-2003 | H | Richland (Richland,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 194 | June-Reg | Shane Victorino | Los Angeles Dodgers | OF | MLB | 1999-2013 | H | St. Anthony (Wailuku, HI) | SF | HI | 3852 | 195 | 65 | 90 | 409 | 201 | .275 | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 195 | June-Reg | Aaron Harang | Texas Rangers | P | MLB | 1997-2013 | C | San Diego State University | SF | CA | 550 | 7 | 0 | 1 | 20 | 0 | .091 | 105 | 104 | 4.19 | 0 | 1802 | 1460 | 293 |
| 1999 | 6 | 196 | June-Reg | Tyler Parker ** | New York Mets | C-1B | AA | 2001-2006 | H | Lassiter (Marietta,GA) | SF | GA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 197 | June-Reg | Shane Wallace | Cleveland Indians | P | AA | 1999-2006 | H | Smith (Carrollton,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 198 | June-Reg | Ryan Pini ** | San Francisco Giants | OF | A+ | 1999-2002 | C | Dixie State College of Utah | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 199 | June-Reg | Jon Henry Kail | Boston Red Sox | OF | NCAA | 2001-2003 | H | Baldwin (Pittsburgh,PA) | SF | PA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 200 | June-Reg | Ben Shaffar | Chicago Cubs | P | AAA | 1999-2006 | C | University of Kentucky | SF | KY | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 201 | June-Reg | Reggie LaPlante | New York Yankees | P | A | 1999-2003 | C | College Ahuntsic | SF | QC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 202 | June-Reg | Blair DeHart | San Diego Padres | P | AA | 1999-2002 | C | James Madison University | SF | VA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 203 | June-Reg | Jason Lane | Houston Astros | OF | MLB | 1996-2012 | C | USC | SF | CA | 1208 | 64 | 7 | 61 | 189 | 10 | .241 | -- | -- | -- | -- | -- | -- | -- |
| 1999 | 6 | 204 | June-Reg | Andrew Brown | Atlanta Braves | P | MLB | 1999-2010 | H | Trinity Christian (Jacksonville,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | 4 | 3 | 3.84 | 0 | 87 | 78 | 0 |