| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1998 | 1 | 6 | June-Reg | Ryan Mills | Minnesota Twins | P | AAA | 1996-2004 | C | Arizona State University | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 2 | 49 | June-Reg | Marcus Moseley | Minnesota Twins | P | A+ | 1998-2004 | H | Cookeville (Cookeville,TN) | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 3 | 79 | June-Reg | Brent Hoard | Minnesota Twins | P | AAA | 1996-2005 | C | Stanford University | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 4 | 109 | June-Reg | Pete Fisher | Minnesota Twins | P | AA | 1997-2005 | C | University of Alabama | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 5 | 139 | June-Reg | Mike Blount | Minnesota Twins | P | - | C | Kansas State University | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 6 | 169 | June-Reg | Brad Pautz ** | Minnesota Twins | P | AA | 1999-2003 | C | University of Minnesota | SF | MN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 7 | 199 | June-Reg | Sam Taulli ** | Minnesota Twins | P | A+ | 2001-2003 | H | Lafayette (Lafayette,LA) | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 8 | 229 | June-Reg | John Edwards | Minnesota Twins | C | A+ | 1998-2003 | C | Triton College | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 9 | 259 | June-Reg | Saul Rivera | Minnesota Twins | P | MLB | 1998-2012 | C | University of Mobile | SF | AL | 9 | 0 | 0 | 0 | 0 | 0 | .111 | 13 | 15 | 4.29 | 4 | 279 | 192 | 0 |
| 1998 | 10 | 289 | June-Reg | Ryan Lundquist ** | Minnesota Twins | OF | A+ | 1996-2003 | C | University of Arkansas | SF | AR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 11 | 319 | June-Reg | Jon Pridie | Minnesota Twins | P | AA | 1998-2004 | H | Prescott (Prescott,AZ) | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 12 | 349 | June-Reg | Kareem Johnson | Minnesota Twins | OF | RK | 1998-2003 | H | J.L. Crowe (Trail,BC) | SF | BC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 13 | 379 | June-Reg | Kyle Hawthorne | Minnesota Twins | IF | A+ | 1979-2002 | C | Pensacola State College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 14 | 409 | June-Reg | Mike Gosling ** | Minnesota Twins | P | MLB | 1999-2010 | H | East (Salt Lake City,UT) | SF | UT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 15 | 439 | June-Reg | Brian Haskell | Minnesota Twins | P | - | H | Canyon Springs (Moreno Valley,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 16 | 469 | June-Reg | Jose Espinal | Minnesota Twins | P | AAA | 1997-2007 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 17 | 499 | June-Reg | J.J. Putz ** | Minnesota Twins | P | MLB | 1999-2013 | C | University of Michigan | SF | MI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 18 | 529 | June-Reg | Kevin Thompson ** | Minnesota Twins | OF | MLB | 2000-2011 | H | Western Hills (Benbrook,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 19 | 559 | June-Reg | Kevin Hodge | Minnesota Twins | P | AAA | 1998-2005 | C | Rice University | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 20 | 589 | June-Reg | Brad Frazier | Minnesota Twins | P | A | 1998-1999 | C | University of Mobile | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 21 | 619 | June-Reg | Marc Bluma ** | Minnesota Twins | P | A | 1996-2000 | C | Wichita State University | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 22 | 649 | June-Reg | Rhett Riviere | Minnesota Twins | P | RK | 1999-2000 | C | Saint Michael's College | SF | VT | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 23 | 679 | June-Reg | Andrew Butler | Minnesota Twins | P | RK | 1998-1998 | C | Bowling Green State University | SF | OH | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 24 | 709 | June-Reg | Juan Padilla | Minnesota Twins | P | MLB | 1998-2011 | C | Jacksonville University | SF | FL | 2 | 0 | 0 | 0 | 0 | 0 | .500 | 4 | 1 | 4.06 | 1 | 62 | 34 | 0 |
| 1998 | 25 | 739 | June-Reg | Eric Sandberg | Minnesota Twins | IF | A+ | 1998-2002 | H | Ferris (Spokane,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 26 | 769 | June-Reg | Jason Scobie ** | Minnesota Twins | P | AAA | 2001-2009 | C | McLennan Community College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 27 | 799 | June-Reg | Craig Selander | Minnesota Twins | RF | A | 1998-2000 | C | University of Minnesota | SF | MN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 28 | 829 | June-Reg | Jeff Marciniak | Minnesota Twins | NCAA | 2001-2001 | C | Rutgers University | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 29 | 859 | June-Reg | Lester Victoria | Minnesota Twins | P | A+ | 1998-2000 | C | University of Central Florida | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 30 | 889 | June-Reg | Jonathan Muller | Minnesota Twins | 3B | - | H | Arapahoe (Littleton,CO) | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 31 | 919 | June-Reg | Brian McMillin | Minnesota Twins | OF | A+ | 1998-2001 | C | University of Evansville | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 32 | 949 | June-Reg | Todd Collura | Minnesota Twins | C | RK | 1998-1999 | C | Polk State College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 33 | 979 | June-Reg | Bryan Gidge | Minnesota Twins | P | Ind | 1999-2000 | C | University of Nevada | SF | NV | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 34 | 1009 | June-Reg | Kevin Frederick | Minnesota Twins | P | MLB | 1998-2008 | C | Creighton University | SF | NE | -- | -- | -- | -- | -- | -- | -- | 0 | 2 | 7.59 | 0 | 40 | 27 | 0 |
| 1998 | 35 | 1039 | June-Reg | Mack Lambert | Minnesota Twins | P | NCAA | 2001-2003 | H | Pearl River (Pearl River,LA) | SF | LA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 36 | 1069 | June-Reg | Richard Denholm | Minnesota Twins | P | RK | 1998-1998 | H | Edgewood (Orlando,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 37 | 1099 | June-Reg | Benjames Smith | Minnesota Twins | P | - | H | Brownwood (Brownwood,TX) | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 38 | 1129 | June-Reg | Tommy Watkins | Minnesota Twins | IF | MLB | 1998-2009 | H | Riverdale (Fort Myers,FL) | SF | FL | 28 | 0 | 0 | 0 | 0 | 1 | .357 | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 39 | 1159 | June-Reg | James Kent ** | Minnesota Twins | P | - | C | Motlow State Community College | SF | TN | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 40 | 1189 | June-Reg | Joe Maruffi | Minnesota Twins | A | 2002-2003 | H | St. Pius X (Albuquerque,NM) | SF | NM | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 41 | 1219 | June-Reg | Kayzell Milton | Minnesota Twins | NCAA | 2000-2002 | H | Homestead (Cupertino,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 42 | 1249 | June-Reg | Andy Neufeld ** | Minnesota Twins | IF | AAA | 2000-2004 | C | State College of Florida, Manatee-Sarasota | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 43 | 1277 | June-Reg | Taylor Grant | Minnesota Twins | NCAA | 2000-2001 | H | Newport (Bellevue,WA) | SF | WA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 44 | 1303 | June-Reg | Bobby Wood ** | Minnesota Twins | P | A+ | 2000-2004 | H | Cherry Creek (Englewood,CO) | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 45 | 1328 | June-Reg | Ernie Bascuas | Minnesota Twins | P | - | C | Miami-Dade College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 46 | 1352 | June-Reg | Mike Bradley | Minnesota Twins | P | - | H | Dr. Phillips (Orlando,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 47 | 1374 | June-Reg | Wade Clark | Minnesota Twins | P | A+ | 2000-2004 | H | Santa Ynez (Santa Ynez,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1998 | 48 | 1395 | June-Reg | Dan Olson ** | Minnesota Twins | NCAA | 2001-2002 | H | Loveland (Loveland,CO) | SF | CO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1998 | 49 | 1415 | June-Reg | Desmond Dailey | Minnesota Twins | OF | - | C | Eastern Arizona College | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |