| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1996 | 3 | 66 | June-Reg | Luis Lorenzana | Pittsburgh Pirates | SS | AAA | 1996-2003 | H | Montgomery (San Diego,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 67 | June-Reg | Dan Cey | Minnesota Twins | SS | AAA | 1994-2000 | C | University of California | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 68 | June-Reg | Brent Butler | St. Louis Cardinals | SS | MLB | 1996-2007 | H | Scotland (Laurinburg,NC) | SF | NC | 553 | 28 | 6 | 11 | 60 | 4 | .248 | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 69 | June-Reg | Yan Lachapelle | Toronto Blue Jays | P | A+ | 1996-2000 | H | -- | SF | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1996 | 3 | 70 | June-Reg | Joe Fraser | Montreal Expos | P | A- | 1995-1999 | H | Katella (Anaheim,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 71 | June-Reg | Antonio McKinney | Detroit Tigers | OF | A+ | 1996-2002 | H | Jefferson (Portland,OR) | SF | OR | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 72 | June-Reg | David Kenna | San Francisco Giants | C | A- | 1996-1998 | H | North Fort Myers (Fort Myers,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 73 | June-Reg | Kevin Barker | Milwaukee Brewers | OF | MLB | 1996-2011 | C | Virginia Tech | SF | VA | 285 | 12 | 0 | 6 | 36 | 3 | .249 | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 74 | June-Reg | Clayton Andrews | Toronto Blue Jays | P | MLB | 1996-2007 | H | Seminole (Seminole,FL) | SF | FL | 3 | 0 | 0 | 0 | 0 | 0 | .000 | 1 | 2 | 10.02 | 0 | 21 | 12 | 2 |
| 1996 | 3 | 75 | June-Reg | A.J. Hinch | Oakland Athletics | OF | MLB | 1997-2005 | C | Stanford University | SF | CA | 953 | 28 | 3 | 32 | 112 | 13 | .219 | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 76 | June-Reg | Kris Stevens | Philadelphia Phillies | P | AA | 1996-2002 | H | Fontana (Fontana,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 77 | June-Reg | Jim Terrell | Chicago White Sox | SS | AA | 1996-2004 | H | Tri-City Christian (Blue Springs,MO) | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 78 | June-Reg | Ed Yarnall | New York Mets | P | MLB | 1994-2007 | C | Louisiana State University | SF | LA | -- | -- | -- | -- | -- | -- | -- | 1 | 0 | 5.40 | 0 | 20 | 14 | 3 |
| 1996 | 3 | 79 | June-Reg | Chad Durbin | Kansas City Royals | P | MLB | 1996-2013 | H | Woodlawn (Baton Rouge,LA) | SF | LA | 24 | 0 | 0 | 0 | 1 | 0 | .083 | 42 | 47 | 4.95 | 5 | 820 | 561 | 75 |
| 1996 | 3 | 80 | June-Reg | Widd Workman | San Diego Padres | P | AA | 1996-1999 | C | Arizona State University | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 81 | June-Reg | Daren Hooper | Baltimore Orioles | OF | A | 1996-1999 | C | University of Arizona | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 82 | June-Reg | Skip Ames | Chicago Cubs | P | A | 1996-1996 | C | University of Alabama | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 83 | June-Reg | Derek Baker | Texas Rangers | 3B | AA | 1996-2001 | C | Santiago Canyon College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 84 | June-Reg | Brandon Byrd | Houston Astros | 3B | A- | 1996-1998 | H | Trinity Presbyterian (Montgomery,AL) | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 85 | June-Reg | Scott Schoeneweis | California Angels | P | MLB | 1996-2010 | C | Duke University | SF | NC | 8 | 1 | 0 | 0 | 1 | 0 | .250 | 47 | 57 | 5.01 | 9 | 972 | 568 | 93 |
| 1996 | 3 | 86 | June-Reg | Shawn Chacon | Colorado Rockies | P | MLB | 1996-2009 | H | Greeley Central (Greeley,CO) | SF | CO | 198 | 4 | 0 | 1 | 10 | 0 | .152 | 45 | 61 | 4.99 | 36 | 922 | 619 | 134 |
| 1996 | 3 | 87 | June-Reg | Tony DeJesus | Seattle Mariners | P | AA | 1996-2010 | H | Havelock (Havelock,NC) | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 88 | June-Reg | Alex Cora | Los Angeles Dodgers | SS | MLB | 1996-2011 | C | University of Miami | SF | FL | 3408 | 140 | 39 | 35 | 286 | 47 | .243 | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 89 | June-Reg | Nick Johnson | New York Yankees | 1B | MLB | 1996-2012 | H | McClatchy (Sacramento,CA) | SF | CA | 2698 | 173 | 5 | 95 | 398 | 29 | .268 | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 90 | June-Reg | David Shepard | Cincinnati Reds | P | AAA | 1996-2006 | C | Clemson University | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 91 | June-Reg | Dernell Stenson | Boston Red Sox | OF | MLB | 1996-2003 | H | LaGrange (LaGrange,GA) | SF | GA | 81 | 5 | 0 | 3 | 13 | 0 | .247 | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 92 | June-Reg | Junior Brignac | Atlanta Braves | OF | AA | 1996-2009 | H | Cleveland (Reseda,CA) | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 93 | June-Reg | Jarrod Mays | Cleveland Indians | P | AA | 1995-2001 | C | Missouri State University | SF | MO | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 94 | June-Reg | Ed Kofler | Tampa Bay Rays | P | AA | 1996-2001 | H | Tarpon Springs (Tarpon Springs,FL) | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1996 | 3 | 95 | June-Reg | Mark Osborne | Arizona Diamondbacks | OF | AA | 1996-2001 | H | Lee County (Sanford,NC) | SF | NC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |