| Year | Rnd | Ovl | Phase | Player | Drafting Team | Pos | HiLvl | Played | Src | Drafted From | SF | State | AB | 2B | 3B | HR | RBI | SB | BAVG | W | L | ERA | SV | IP | SO | GS |
| 1986 | 2 | 27 | June-Sec | Rocky Elli ** | New York Mets | P | AAA | 1986-1994 | C | Kishwaukee College | SF | IL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 28 | June-Sec | David Boss ** | Texas Rangers | P | A- | 1989-1990 | C | San Jose City College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 29 | June-Sec | Mike Ross ** | San Diego Padres | SS-2B | AAA | 1988-1992 | C | Fresno City College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 30 | June-Sec | Brian Drahman ** | Milwaukee Brewers | P | MLB | 1986-2001 | C | Miami-Dade College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 31 | June-Sec | Craig Wilson ** | Houston Astros | C | MLB | 1984-2003 | C | Cerritos College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 32 | June-Sec | Paul Kuzniar | Cleveland Indians | P | AA | 1987-1990 | C | University of Houston | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 33 | June-Sec | Jonathan Hurst ** | Cincinnati Reds | P | MLB | 1987-1998 | C | Spartanburg Methodist College | SF | SC | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 34 | June-Sec | Richard Hochanadel ** | California Angels | P | - | C | Labette Community College | SF | KS | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 35 | June-Sec | Jerald Frost ** | Atlanta Braves | IF | A+ | 1986-1989 | C | Ocean County College | SF | NJ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 36 | June-Sec | Mike Butcher ** | Kansas City Royals | P | MLB | 1986-1998 | C | Northeastern Oklahoma A&M College | SF | OK | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 37 | June-Sec | Wade Taylor ** | Los Angeles Dodgers | P | MLB | 1987-1993 | C | Jefferson Davis Community College | SF | AL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 38 | June-Sec | Larry Oedewaldt ** | Seattle Mariners | IF | A+ | 1988-1989 | C | San Diego Mesa College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 39 | June-Sec | Mike Reitzel ** | Chicago Cubs | P | A+ | 1988-1990 | C | University of Hawaii | SF | HI | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 40 | June-Sec | Robert Cuff | Detroit Tigers | P | RK | 1987-1987 | C | Florida Southern College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 41 | June-Sec | Roy Westbrook ** | Montreal Expos | OF | - | C | Angelina College | SF | TX | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 42 | June-Sec | David Keating ** | Toronto Blue Jays | OF | AA | 1989-1994 | C | UCLA | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 43 | June-Sec | Mark Hudson | Philadelphia Phillies | P | - | C | West Valley College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 44 | June-Sec | Rich Bielski ** | New York Yankees | IF | RK | 1987-1990 | C | Miami-Dade College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 45 | June-Sec | Keith Kaub ** | St. Louis Cardinals | 1B | A+ | 1988-1990 | C | Golden West College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 46 | June-Sec | Norm Bromley ** | Pittsburgh Pirates | IF | A- | 1987-1987 | C | Cecil College | SF | MD | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 47 | June-Sec | Carlton Cochran | Oakland Athletics | P | - | C | Central Arizona College | SF | AZ | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | |
| 1986 | 2 | 48 | June-Sec | Eric Albright ** | Minnesota Twins | C | A+ | 1989-1992 | C | Los Angeles Harbor College | SF | CA | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 1986 | 2 | 49 | June-Sec | Jaime Navarro ** | Baltimore Orioles | P | MLB | 1987-2003 | C | Miami-Dade College | SF | FL | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |