| 1 | 30 | June-Reg | Adam Ottavino | P | 20 | 6-4 | | B | R | AAA | | Northeastern University | $950,000 |
| 1 | 42 | June-Reg | Chris Perez | P | 20 | 6-4 | 225 | R | R | MLB | 2008-2009 | University of Miami | $800,000 |
| 2 | 54 | June-Reg | Brad Furnish | P | 21 | 6-1 | 185 | B | L | AA | | Texas Christian University | $60,000 |
| 2 | 74 | June-Reg | Jon Jay | OF | 21 | 5-11 | 200 | L | L | AAA | | University of Miami | $480,000 |
| 2 | 76 | June-Reg | Mark Hamilton | 1B | 21 | 6-4 | 220 | L | L | AAA | | Tulane University | $465,000 |
| 3 | 106 | June-Reg | Gary Daley | P | 20 | 6-3 | 200 | R | R | AA | | Cal Poly | $325,000 |
| 4 | 136 | June-Reg | Eddie Degerman | P | 22 | 6-4 | 205 | R | R | AA | | Rice University | $100,000 |
| 5 | 166 | June-Reg | Shane Robinson | CF | 21 | 5-9 | 165 | R | R | MLB | 2009-2009 | Florida State University | $175,000 |
| 6 | 196 | June-Reg | Tyler Norrick | P | 22 | 6-3 | 190 | L | L | AAA | | Southern Illinois University | $45,000 |
| 7 | 226 | June-Reg | Luke Gorsett | OF | 21 | 6-1 | 0 | R | R | AA | | University of Nebraska | $60,000 |
| 8 | 256 | June-Reg | Allen Craig | SS | 21 | 6-2 | 190 | R | R | AAA | | University of California | $15,000 |
| 9 | 286 | June-Reg | Matthew North | P | 18 | 6-4 | 170 | R | R | Rookie | | Deer Valley (Antioch,CA) | $150,000 |
| 10 | 316** | June-Reg | Blair Erickson | P | 21 | 6-1 | 205 | R | R | A+ | | University of California-Irvine | |
| 11 | 346 | June-Reg | P.J. Walters | P | 21 | 6-4 | 200 | R | R | MLB | 2009-2009 | University of South Alabama | |
| 12 | 376 | June-Reg | David Carpenter | C | 20 | 6-2 | 200 | R | R | A+ | | West Virginia University | |
| 13 | 406 | June-Reg | Travis Mitchell | CF | 18 | 6-3 | 185 | R | R | A | | Parkway Central (Chesterfield,MO) | |
| 14 | 436 | June-Reg | Jonathan Edwards | RF | 18 | 6-5 | 230 | R | R | A | | Keller (Keller,TX) | |
| 15 | 466 | June-Reg | Lance Zawadzki | SS | 21 | 5-11 | 185 | B | R | AA | | San Diego State University | |
| 16 | 496 | June-Reg | Thomas Pham | SS | 18 | 6-1 | 175 | R | R | A+ | | Durango (Las Vegas,NV) | |
| 17 | 526 | June-Reg | Nathan Southard | CF | 22 | 5-10 | 190 | R | R | A+ | | Tulane University | |
| 18 | 556 | June-Reg | Amaury Marti | RF | 31 | 6-0 | 190 | R | R | AAA | | | |
| 19 | 586 | June-Reg | Brandon Buckman | 1B | 22 | 6-6 | 205 | L | L | AA | | University of Nebraska | |
| 20 | 616 | June-Reg | Brandon Cooney | P | 20 | 6-6 | 240 | R | R | A+ | | Florida Atlantic University | |
| 21 | 646 | June-Reg | Mark Diapoules | P | 18 | 6-0 | 190 | R | R | A+ | | Martin County (Stuart,FL) | |
| 22 | 676 | June-Reg | Casey Mulligan | P | 18 | 6-2 | 190 | R | R | AA | | Valencia (Valencia,CA) | |
| 23 | 706 | June-Reg | LaCurtis Mayes | P | 17 | 5-11 | 185 | R | R | A- | | Poly (Riverside,CA) | |
| 24 | 736 | June-Reg | Gomez | P | | | | | | College | | University of Texas-Pan American | |
| 25 | 766 | June-Reg | D'Marcus Ingram | CF | 18 | 5-9 | 170 | R | R | A | | North Little Rock (North Little Rock,AR) | |
| 26 | 796 | June-Reg | Garrett Bussiere | C | 20 | 6-3 | 178 | R | R | Rookie | | University of California | |
| 27 | 826 | June-Reg | Christian Reyes | C | 20 | 6-1 | 215 | R | R | A | | Porterville College | |
| 28 | 856 | June-Reg | Luke Gregerson | P | 22 | 6-3 | 200 | R | R | MLB | 2009-2009 | Saint Xavier University | |
| 29 | 886 | June-Reg | William Groff | 2B | 21 | 5-11 | 185 | R | R | A- | | SUNY-Cortland | |
| 30 | 916 | June-Reg | Jared Schweitzer | 3B | 22 | 6-1 | 185 | R | R | A | | University of Kansas | |
| 31 | 946 | June-Reg | Mark Shorey | RF | 21 | 6-0 | 230 | L | L | AAA | | High Point University | |
| 32 | 976 | June-Reg | Ross Smith | CF | 18 | 6-2 | 175 | R | R | Rookie | | Dodge County (Eastman,GA) | |
| 33 | 1006 | June-Reg | Brian Schroeder | P | 21 | 6-1 | 205 | L | L | A | | UCLA | |
| 34 | 1036 | June-Reg | Isa Garcia | 2B | 21 | 5-10 | 180 | R | R | AA | | University of Houston | |
| 35 | 1066 | June-Reg | Jim Rapoport | CF | 21 | 5-11 | 160 | L | L | AA | | Stanford University | |
| 36 | 1096 | June-Reg | Adrian Alaniz | P | 22 | 6-2 | 200 | R | R | AA | | University of Texas | |
| 37 | 1126 | June-Reg | Logan Collier | P | 21 | 6-7 | 195 | R | R | A- | | Guilford College | |
| 38 | 1156 | June-Reg | Scott Thomas | C | 21 | 5-11 | 202 | L | R | AA | | Missouri Baptist University | |
| 39 | 1186 | June-Reg | Matthew Michael | P | 22 | 5-11 | 190 | L | L | Rookie | | Grand Canyon University | |
| 40 | 1216 | June-Reg | Tyler Mach | 3B | 21 | 6-1 | 205 | R | R | A- | | Oklahoma State University | |
| 41 | 1246** | June-Reg | Mitch Canham | C | 21 | 6-2 | 215 | L | R | AA | | Oregon State University | $0 |
| 42 | 1275 | June-Reg | Kyle Mura | P | 21 | 6-4 | 215 | R | R | AA | | Loyola Marymount University | |
| 43 | 1304 | June-Reg | William Torres | SS | 18 | 5-9 | 190 | R | R | - | | St. Peter's Prep (Jersey City,NJ) | |
| 44 | 1333 | June-Reg | Cameron Grant | CF | 18 | 5-9 | 150 | R | R | - | | Hermitage (Richmond,VA) | |
| 45 | 1362 | June-Reg | John Goodman | P | | | | | | College | | Georgia Tech | |
| 46 | 1390 | June-Reg | Robert Woodard | P | 21 | 6-1 | 205 | R | R | AAA | | University of North Carolina | |
| 47 | 1418 | June-Reg | Nicholas Additon | P | 18 | 6-3 | 170 | L | L | AA | | Western (Davie,FL) | |
| 48 | 1446 | June-Reg | Garry Thomas | P | 18 | 5-10 | 0 | L | L | - | | Pine Bluff (Pine Bluff,AR) | |
| 49 | 1474 | June-Reg | Gary Taylor | RF | 19 | 6-5 | 185 | R | R | - | | Holmes Community College | |
| 50 | 1502 | June-Reg | Charles Matthews | P | 17 | 6-5 | 200 | R | R | - | | Athens (Athens,GA) | |