| 1 | 1 | June-Reg | Luke Hochevar | P | 22 | 6-5 | 205 | R | R | MLB | 2007-2009 | | $3,500,000 |
| 2 | 45 | June-Reg | Jason Taylor | SS | 18 | 6-0 | 200 | R | R | A | | Kellam (Virginia Beach,VA) | $762,500 |
| 3 | 77 | June-Reg | Blake Wood | P | 20 | 6-4 | 225 | R | R | AA | | Georgia Tech | $460,000 |
| 4 | 107 | June-Reg | Derrick Robinson | OF | 18 | 5-11 | 170 | B | L | A+ | | Yonge (Gainesville,FL) | $850,000 |
| 5 | 137 | June-Reg | Jason Godin | P | 21 | 6-5 | 170 | R | R | AAA | | Old Dominion University | $210,000 |
| 6 | 167 | June-Reg | Harold Mozingo | P | 21 | 6-1 | 175 | R | R | A | | Virginia Commonwealth University | $165,000 |
| 7 | 197 | June-Reg | Brett Bigler | OF | 21 | 6-1 | 185 | L | L | AAA | | University of California-Riverside | $130,000 |
| 8 | 227 | June-Reg | Josh Cribb | P | 23 | 5-10 | 190 | R | R | A | | Clemson University | $75,000 |
| 9 | 257 | June-Reg | Marc Maddox | 2B | 22 | 5-11 | 185 | R | R | AA | | University of Southern Mississippi | $50,000 |
| 10 | 287 | June-Reg | Nick Van Stratten | CF | 21 | 6-0 | 195 | R | R | A+ | | St. Louis Community College-Meramec | $65,000 |
| 11 | 317 | June-Reg | Tyler Chambliss | P | 21 | 5-11 | 175 | R | R | A+ | | Florida State University | |
| 12 | 347 | June-Reg | Everett Teaford | P | 22 | 6-0 | 155 | L | L | AA | | Georgia Southern University | |
| 13 | 377 | June-Reg | Kurt Mertins | 2B | 20 | 6-0 | 175 | R | R | AA | | College of the Desert | |
| 14 | 407 | June-Reg | Daniel Best | P | 22 | 6-3 | 170 | R | R | Rookie | | University of Southern Mississippi | |
| 15 | 437 | June-Reg | Nick Francis | OF | 20 | 6-3 | 195 | R | R | A | | Pensacola Junior College | |
| 16 | 467 | June-Reg | Tyrone Wilson | SS | 18 | 5-9 | 180 | L | R | Rookie | | Southern (Durham,NC) | |
| 17 | 497 | June-Reg | Matt Morizio | C | 22 | 6-3 | 215 | L | R | A+ | | Northeastern University | |
| 18 | 527 | June-Reg | Chase Larsson | OF | 17 | 6-2 | 190 | L | L | - | | Kitsilano SS (Vancouver,BC) | |
| 19 | 557** | June-Reg | Jeffrey Inman | P | 18 | 6-3 | 180 | R | R | A- | | Garces Memorial (Bakersfield,CA) | $0 |
| 20 | 587** | June-Reg | Brad Boxberger | P | 18 | 6-2 | 185 | R | R | College | | Foothill (Santa Ana,CA) | $0 |
| 21 | 617 | June-Reg | Burke Baldwin | P | 21 | 6-5 | 215 | R | L | A | | Elgin Community College | |
| 22 | 647 | June-Reg | Romas Hicks | P | | | | | | College | | Georgia State University | |
| 23 | 677 | June-Reg | Aaron Hartsock | P | 22 | 6-3 | 200 | R | R | AAA | | California Baptist University | |
| 24 | 707 | June-Reg | Tyler Moyneur | C | 19 | 6-2 | 190 | R | R | - | | Arizona Western College | |
| 25 | 737 | June-Reg | Rafael Valenzuela | SS | 18 | 6-1 | 175 | L | R | College | | Nogales (Nogales,AZ) | |
| 26 | 767 | June-Reg | Darrell Lockett | CF | 18 | 5-9 | 185 | B | R | - | | Weatherford (Weatherford,TX) | |
| 27 | 797 | June-Reg | Colby Killian | P | 18 | 6-0 | 192 | R | R | - | | Warren County (McMinnville,TN) | |
| 28 | 827 | June-Reg | Michael Wheeler | OF | 19 | 5-10 | 190 | R | R | - | | Walters State Community College | |
| 29 | 857 | June-Reg | Steven Rinaudo | SS | 18 | 6-2 | 185 | R | R | College | | American River College | |
| 30 | 887 | June-Reg | Tyler Pearson | P | 21 | 6-2 | 195 | R | R | Ind | | University of Northern Colorado | |
| 32 | 947 | June-Reg | Fernando Garcia | 2B | 17 | 6-0 | 160 | S | R | A | | Immaculada (Arecibo,PR) | |
| 33 | 977 | June-Reg | Harold Smith | CF | 18 | 5-9 | 165 | R | R | - | | Palmetto (Palmetto,FL) | |
| 34 | 1007 | June-Reg | Jared Grace | 1B | 18 | 6-5 | 200 | R | R | College | | Pensacola Junior College | |
| 35 | 1037 | June-Reg | Anthony Stoval | P | 17 | 6-7 | 230 | R | R | - | | Kailua (Kailua,HI) | |
| 36 | 1067 | June-Reg | Manuel Garcia | P | 18 | 6-0 | 182 | R | R | - | | Cochise College | |
| 37 | 1097 | June-Reg | Kaleb Harst | C | 18 | 6-0 | 190 | R | R | - | | More (Lafayette,LA) | |
| 38 | 1127 | June-Reg | Michael Dabbs | LF | 19 | 6-0 | 180 | L | R | A- | | Cowley College | |
| 39 | 1157 | June-Reg | Steven Moore | P | 18 | 6-3 | 175 | R | R | - | | Thomasville (Thomasville,GA) | |
| 40 | 1187 | June-Reg | Christopher Snipes | P | 18 | 6-3 | 190 | L | L | - | | Warner Robins (Warner Robins,GA) | |
| 41 | 1217 | June-Reg | Jeremy Toole | P | 18 | 6-4 | 240 | R | R | A- | | Huntsville (Huntsville,TX) | |
| 42 | 1247 | June-Reg | Todd McBride | CF | 18 | 5-10 | 175 | R | L | - | | The Dalles (The Dalles,OR) | |
| 43 | 1276 | June-Reg | Brennan Thorpe | P | 19 | 6-7 | 220 | R | R | College | | Saddleback College | |
| 44 | 1305 | June-Reg | Brian Paukovits | P | 19 | 6-7 | 238 | R | R | Rookie | | Southwestern Community College | |
| 45 | 1334 | June-Reg | Eric Martinez | P | 19 | 6-2 | 180 | L | R | - | | Southwestern Community College | |
| 46 | 1363** | June-Reg | Chase Lehr | P | 18 | 6-2 | 185 | R | R | A- | | Centennial (Peoria,AZ) | |
| 47 | 1391 | June-Reg | Ryan Cisterna | C | 20 | 6-1 | 200 | R | R | Rookie | | Chandler-Gilbert Community College | |
| 48 | 1419 | June-Reg | Colby Ho | 3B | 18 | 5-11 | 195 | R | R | - | | Kaiser (Honolulu,HI) | |
| 49 | 1447 | June-Reg | Rocky Gale | C | 18 | 6-0 | 180 | R | R | College | | North Salem (Salem,OR) | |
| 50 | 1475 | June-Reg | Jarrod Dyson | CF | 21 | 5-10 | 160 | L | R | AA | | Southwest Mississippi Community College | |