| 2 | 66 | June-Reg | Grant Johnson | P | 21 | 6-6 | 220 | R | R | AA | | University of Notre Dame | $1,260,000 |
| 3 | 96 | June-Reg | Mark Reed | C | 18 | 5-11 | 175 | L | R | AA | | Bonita (La Verne,CA) | $650,000 |
| 4 | 126 | June-Reg | Chris Shaver | P | 22 | 6-7 | 235 | L | L | AAA | | College of William and Mary | $70,000 |
| 5 | 156 | June-Reg | Adrian Ortiz | OF | 17 | 6-0 | 172 | L | R | A+ | | Puerto Rico Baseball Academy (Gurabo,PR) | $160,000 |
| 6 | 186 | June-Reg | Tim Layden | P | 21 | 6-2 | 180 | L | L | AA | | Duke University | $155,000 |
| 7 | 216 | June-Reg | Mitch Atkins | P | 18 | 6-3 | 210 | R | R | MLB | 2009-2009 | Northeast Guilford (McLeansville,NC) | $149,000 |
| 8 | 246 | June-Reg | Eric Patterson | 2B | 21 | 5-11 | 173 | L | R | MLB | 2007-2009 | Georgia Tech | $300,000 |
| 9 | 276 | June-Reg | Ryan Norwood | 1B | 21 | 6-4 | 220 | R | L | A+ | | East Carolina University | $70,000 |
| 10 | 306 | June-Reg | Sam Fuld | OF | 22 | 5-10 | 180 | L | L | MLB | 2007-2009 | Stanford University | $25,000 |
| 11 | 336 | June-Reg | Jon Hunton | P | 21 | 6-9 | 230 | R | R | AA | | Lamar University | |
| 12 | 366 | June-Reg | Sean Gallagher | P | 18 | 6-1 | 210 | R | R | MLB | 2007-2009 | St. Thomas Aquinas (Fort Lauderdale,FL) | $60,000 |
| 13 | 396 | June-Reg | Ryan Moorer | P | 18 | 6-3 | 205 | R | R | A | | Peabody Veterans Memorial (Peabody,MA) | |
| 14 | 426** | June-Reg | Eli Iorg | OF | 21 | 6-3 | 200 | R | R | AAA | | University of Tennessee | $0 |
| 15 | 456 | June-Reg | Alfred Joseph | OF | 17 | 5-11 | 185 | R | R | A+ | | Moody (Corpus Christi,TX) | |
| 16 | 486 | June-Reg | J.R. Mathes | P | 22 | 6-3 | 205 | L | L | AAA | | Western Michigan University | |
| 17 | 516 | June-Reg | Jerry Blevins | P | 20 | 6-6 | 185 | L | L | MLB | 2007-2009 | University of Dayton | |
| 18 | 546 | June-Reg | Jake Marsello | P | 21 | 6-2 | 210 | R | R | Rookie | | Boston College | |
| 19 | 576** | June-Reg | Micah Owings | P | 21 | 6-5 | 220 | R | R | MLB | 2007-2009 | Georgia Tech | $0 |
| 20 | 606** | June-Reg | Trey Taylor | P | 21 | 6-2 | 200 | L | L | Rookie | | Baylor University | |
| 21 | 636 | June-Reg | Will Fenton | P | 21 | 6-2 | 205 | R | R | A | | University of Washington | |
| 22 | 666 | June-Reg | Walter Diaz | SS | 18 | 6-0 | 180 | R | R | AAA | | Braddock (Miami,FL) | |
| 23 | 696 | June-Reg | Chris Gaskin | 1B | 21 | 6-2 | 190 | R | R | A- | | Manhattan College | |
| 24 | 726 | June-Reg | Jeff Culpepper | OF | 22 | 6-1 | 180 | L | R | A+ | | Gonzaga University | |
| 25 | 756** | June-Reg | Casey Erickson | P | 18 | 6-3 | 187 | R | R | A | | Glenwood (Chatham,IL) | |
| 26 | 786 | June-Reg | Paul Cinder | P | | | | | | College | | Lake Mary (Lake Mary,FL) | |
| 27 | 816 | June-Reg | Jason Kosow | P | 21 | 6-3 | 200 | R | R | A- | | Babson College | |
| 28 | 846 | June-Reg | Jon Douillard | C | 22 | 6-0 | 190 | L | R | A | | Vanderbilt University | |
| 29 | 876 | June-Reg | Mike Svetlic | 2B | 22 | 5-9 | 175 | R | R | College | | UCLA | |
| 30 | 906 | June-Reg | Russ Canzler | 3B | 18 | 6-2 | 190 | R | R | AA | | Hazleton Area (Hazleton,PA) | |
| 31 | 936 | June-Reg | Jesse Estrada | P | 20 | 6-8 | 280 | R | R | AAA | | Grayson County College | |
| 32 | 966** | June-Reg | Cody Gilbert | 3B | 18 | 6-3 | 185 | R | R | A- | | Lincoln (Vincennes,IN) | |
| 33 | 996 | June-Reg | Randy Brown | OF | 18 | 6-0 | 172 | R | R | Rookie | | Jonesboro (Jonesboro,GA) | |
| 34 | 1026** | June-Reg | Dustin Bamberg | C | | | | | | College | | Winter Haven (Winter Haven,FL) | |
| 35 | 1056** | June-Reg | Drew O'Connell | P | 18 | 6-3 | 210 | R | R | - | | Barrington (Barrington,IL) | |
| 36 | 1086** | June-Reg | Colby Wark | P | | | | | | College | | Redmond (Redmond,OR) | |
| 37 | 1116** | June-Reg | Michael Hyle | P | 22 | 6-2 | 200 | R | R | A | | University of Georgia | |
| 38 | 1146 | June-Reg | Kurt Eichorn | OF | | | | | | College | | Kent State University | |
| 39 | 1176** | June-Reg | Trent Luyster | P | 21 | 6-3 | 195 | L | L | College | | Ohio State University | |
| 40 | 1206 | June-Reg | Marcus Crockett | OF | 17 | 5-10 | 190 | L | L | A- | | St. Bernard (Playa del Ray,CA) | |
| 41 | 1236 | June-Reg | Kenn Kasparek | P | 18 | 6-8 | 200 | R | R | A | | Weimar (Weimar,TX) | |
| 42 | 1265 | June-Reg | Ryan Morgan | 3B | 21 | 6-1 | 180 | L | R | Ind | | Boston College | |
| 43 | 1294** | June-Reg | Adam Daniels | P | 21 | 6-2 | 190 | L | L | AAA | | Eastern Oklahoma State College | |
| 44 | 1323 | June-Reg | Zane Green | OF | 22 | 5-10 | 180 | L | L | Rookie | | Clemson University | |
| 45 | 1352 | June-Reg | Chris Dunkin | C | 18 | 6-1 | 225 | R | R | College | | LaPorte (LaPorte,TX) | |
| 46 | 1381 | June-Reg | Greg Fudacz | P | | | | | | - | | Cle Elum-Roslyn (Cle Elum,WA) | |
| 47 | 1410 | June-Reg | Andrew Liebel | P | 18 | 6-1 | 195 | R | R | AA | | Damien (La Verne,CA) | |
| 48 | 1438 | June-Reg | Olin Wick | C | 22 | 6-0 | 180 | B | R | AA | | University of Puget Sound | |
| 49 | 1466 | June-Reg | Brandon Harmon | P | 19 | 6-5 | 200 | R | R | College | | Columbia Basin College | |
| 50 | 1494 | June-Reg | Gerald Miller | OF | 22 | 5-11 | 180 | L | R | Ind | | Prairie View A&M University | |