| 1 | 9 | June-Reg | Christopher Nelson | SS | 18 | 5-11 | 176 | R | R | AA | | Redan (Stone Mountain,GA) | $2,150,000 |
| 2 | 50 | June-Reg | Seth Smith | OF | 21 | 6-3 | 215 | L | L | MLB | 2007-2009 | University of Mississippi | $690,000 |
| 3 | 80 | June-Reg | Steve Register | P | 21 | 6-1 | 170 | R | R | MLB | 2008-2009 | Auburn University | $450,000 |
| 4 | 110 | June-Reg | Chris Iannetta | C | 21 | 5-11 | 195 | R | R | MLB | 2006-2009 | University of North Carolina | $305,000 |
| 5 | 140 | June-Reg | Matt Macri | 3B | 22 | 6-2 | 200 | R | R | MLB | 2008-2008 | University of Notre Dame | $205,000 |
| 6 | 170 | June-Reg | Joe Koshansky | 1B | 22 | 6-4 | 225 | L | L | MLB | 2007-2008 | University of Virginia | $40,000 |
| 7 | 200 | June-Reg | Jake Postlewait | P | 22 | 6-0 | 195 | B | L | A+ | | Oregon State University | $30,000 |
| 8 | 230 | June-Reg | Jim Miller | P | 22 | 6-1 | 200 | R | R | MLB | 2008-2008 | University of Louisiana-Monroe | $12,000 |
| 9 | 260 | June-Reg | Dustin Hahn | 3B | 21 | 6-1 | 195 | L | R | A+ | | Sacramento City College | $70,000 |
| 10 | 290 | June-Reg | Jarrett Grube | P | 22 | 6-4 | 220 | R | R | AAA | | University of Memphis | $7,500 |
| 11 | 320 | June-Reg | Chris Buechner | P | 20 | 6-3 | 235 | R | R | A | | Lamar University | |
| 12 | 350 | June-Reg | David Patton | P | 20 | 6-3 | 175 | R | R | MLB | 2009-2009 | Green River Community College | |
| 13 | 380 | June-Reg | Matt Miller | OF | 21 | 6-2 | 210 | R | R | AAA | | Texas State University | |
| 14 | 410 | June-Reg | Dexter Fowler | OF | 18 | 6-5 | 189 | B | R | MLB | 2008-2009 | Milton (Alpharetta,GA) | $925,000 |
| 15 | 440 | June-Reg | Justin Nelson | OF | 21 | 6-3 | 205 | L | L | AA | | University of California | |
| 16 | 470 | June-Reg | Patrick Stanley | P | 21 | 6-7 | 210 | R | R | AAA | | Pace University | |
| 17 | 500** | June-Reg | Dominick Foster | P | 18 | | | | | - | | Buchanan (Clovis,CA) | |
| 18 | 530 | June-Reg | Jeff Dragicevich | SS | 21 | 6-2 | 200 | R | R | AAA | | University of California | |
| 19 | 560 | June-Reg | Josh Newman | P | 22 | 6-1 | 215 | L | L | MLB | 2007-2008 | Ohio State University | |
| 20 | 590** | June-Reg | Rene Garcia | P | | | | | | - | | Sunnyside (Tucson,AZ) | |
| 21 | 620 | June-Reg | Matt Prendergast | P | 22 | 6-4 | 210 | R | R | A- | | Virginia Commonwealth University | |
| 22 | 650 | June-Reg | Stephan Edsall | P | 22 | 6-4 | 205 | R | R | A- | | Rollins College | |
| 23 | 680 | June-Reg | Jay Metzger | P | 22 | 6-4 | 205 | L | L | Rookie | | University of North Carolina-Greensboro | |
| 24 | 710 | June-Reg | Rob Hosgood | OF | 22 | 6-2 | 210 | L | L | A | | Central Connecticut State University | |
| 25 | 740** | June-Reg | Aaron Lovett | P | 18 | 6-5 | 195 | R | R | College | | Brownstown (Brownstown,IL) | |
| 26 | 770 | June-Reg | Kyle Wilson | C | 21 | 6-1 | 215 | R | R | A+ | | Fresno State University | |
| 27 | 800 | June-Reg | Andrew Koubek | P | 19 | 5-11 | 185 | L | L | - | | Eau Gallie (Melbourne,FL) | |
| 28 | 830 | June-Reg | Steven Thomas | P | 22 | 6-3 | 201 | R | R | A- | | Texas Tech University | |
| 29 | 860** | June-Reg | Kyle Foster | P | | 6-1 | 210 | B | L | College | | Castle Rock (Castle Rock,WA) | |
| 30 | 890 | June-Reg | Michael Criswell | P | | | | | | - | | Lincoln (Tallahassee,FL) | |
| 31 | 920 | June-Reg | Xavier Cedeno | P | 17 | 6-1 | 165 | L | L | AA | | Asuncioan Rodriguez (Desal,PR) | |
| 32 | 950 | June-Reg | Jackie Davidson | P | | | | | | - | | Richland College | |
| 33 | 980 | June-Reg | Justin Jameson | OF | 18 | | | L | L | - | | Southern Union State Community College | |
| 34 | 1010 | June-Reg | Kurt Crowell | OF | 19 | 6-3 | 215 | R | R | A | | East Los Angeles College | |
| 35 | 1040 | June-Reg | Josiah Cowden | P | | | | | | - | | Cypress Community Christian (Kingwood,TX) | |
| 36 | 1070 | June-Reg | Jeremey White | P | 22 | 6-2 | 205 | R | L | A- | | Cal Poly Pomona | |
| 37 | 1100** | June-Reg | Todd Frazier | OF | 18 | 6-3 | 215 | R | R | AAA | | Toms River South (Toms River,NJ) | |
| 38 | 1130** | June-Reg | Reidier Gonzalez | P | 18 | 5-11 | 180 | R | R | AA | | St. Petersburg College | |
| 39 | 1160 | June-Reg | Jonathan Santos | SS | 18 | 5-11 | 165 | B | R | A | | Puerto Rico Baseball Academy (Gurabo,PR) | |
| 40 | 1190 | June-Reg | Gary McKissick | P | | | | | | - | | Itawamba Community College | |
| 41 | 1220 | June-Reg | Chris Henry | P | 18 | 6-3 | 175 | L | L | College | | San Joaquin Delta College | |
| 42 | 1249 | June-Reg | Colt Sedbrook | 2B | 18 | 5-11 | 180 | R | R | AA | | Broomfield (Broomfield,CO) | |
| 43 | 1278** | June-Reg | Tony Snow | P | 20 | 6-4 | 210 | R | R | A- | | Edmonds Community College | |
| 44 | 1307 | June-Reg | Justin Keadle | P | 21 | 6-2 | 211 | R | R | A- | | Wake Forest University | |
| 45 | 1336 | June-Reg | Colby Lehman | P | 18 | | | | | - | | Bishop (Bishop,CA) | |
| 46 | 1365 | June-Reg | Kody Keroher | P | 19 | 6-2 | 220 | R | R | College | | Solano Community College | |
| 47 | 1394** | June-Reg | Joshua Banda | OF | 18 | 6-1 | 195 | R | R | A- | | Cypress College | |
| 48 | 1423 | June-Reg | J.T. Lafountain | C | 22 | 6-0 | 185 | B | R | AA | | University of Louisville | |
| 49 | 1451 | June-Reg | Brian Brohm | OF | 18 | 6-4 | 224 | R | R | - | | Trinity (Louisville,KY) | |
| 50 | 1479 | June-Reg | Andy Goff | 2B | 18 | 6-0 | 195 | R | R | A+ | | Mount Lebanon (Pittsburgh,PA) | |