| 1 | 22 | June-Reg | David Aardsma | P | 21 | 6-5 | 200 | R | R | MLB | 2004-2009 | Rice University | $1,425,000 |
| 1 | 34 | June-Reg | Craig Whitaker | P | 18 | 6-4 | 170 | R | R | AA | | Lufkin (Lufkin,TX) | $975,000 |
| 2 | 55 | June-Reg | Todd Jennings | C | 21 | 6-0 | 190 | R | R | AAA | | Long Beach State University | $620,000 |
| 2 | 63 | June-Reg | Nate Schierholtz | 3B | 19 | 6-2 | 215 | L | R | MLB | 2007-2009 | Chabot College | $572,000 |
| 3 | 93 | June-Reg | Brian Buscher | 3B | 22 | 6-0 | 185 | L | R | MLB | 2007-2009 | University of South Carolina | $215,000 |
| 4 | 123 | June-Reg | Brooks McNiven | P | 22 | 6-5 | 180 | R | R | AAA | | University of British Columbia | $105,000 |
| 5 | 153 | June-Reg | Mike Wagner | OF | 21 | 6-3 | 210 | R | R | AA | | University of Washington | $170,000 |
| 6 | 183 | June-Reg | Billy Sadler | P | 21 | 6-0 | 190 | R | R | MLB | 2006-2009 | Louisiana State University | $130,000 |
| 7 | 213 | June-Reg | Pat Misch | P | 21 | 6-2 | 170 | R | L | MLB | 2006-2009 | Western Michigan University | $20,000 |
| 8 | 243 | June-Reg | Tim Hutting | SS | 21 | 6-0 | 190 | R | R | AAA | | Long Beach State University | $17,500 |
| 9 | 273 | June-Reg | Kellen Ludwig | P | 20 | 6-4 | 230 | R | R | A- | | Chipola College | $90,000 |
| 10 | 303 | June-Reg | Jesse Schmidt | OF | 21 | 6-1 | 200 | B | R | A | | Sacramento State | $50,000 |
| 11 | 333 | June-Reg | Jeff Petersen | P | 21 | 6-4 | 225 | R | R | AAA | | University of Washington | |
| 12 | 363 | June-Reg | Ryan Sadowski | P | 20 | 6-3 | 185 | R | R | MLB | 2009-2009 | University of Florida | |
| 13 | 393 | June-Reg | Nick Conte | C | 21 | 5-10 | 175 | R | R | A | | St. Mary's College of California | |
| 14 | 423 | June-Reg | Sean Martin | P | 23 | 6-1 | 190 | R | R | A+ | | Cal State Fullerton | |
| 15 | 453 | June-Reg | Ben Thurmond | P | 21 | 6-0 | 190 | R | R | A+ | | Arizona State University | |
| 16 | 483 | June-Reg | Mike Mooney | OF | 20 | 6-1 | 205 | R | R | AAA | | College of San Mateo | |
| 17 | 513 | June-Reg | Marcus Sanders | SS | 17 | 6-0 | 170 | R | R | A+ | | Sarasota (Sarasota,FL) | |
| 18 | 543 | June-Reg | Patrick Dobson | OF | 22 | 6-3 | 210 | R | R | AA | | UNLV | |
| 19 | 573 | June-Reg | Jon Coutlangus | OF | 22 | 6-1 | 180 | L | L | MLB | 2007-2007 | University of South Carolina | |
| 20 | 603 | June-Reg | Raul Rodriguez | C | 18 | 6-0 | 210 | R | R | Ind | | Florida Christian (Miami,FL) | |
| 21 | 633 | June-Reg | Sean Watson | P | 17 | 6-3 | 215 | R | R | AAA | | Florida Christian (Miami,FL) | |
| 22 | 663** | June-Reg | Nate Fogle | P | 19 | 6-4 | 205 | R | R | A+ | | Mount Hood Community College | |
| 23 | 693 | June-Reg | Mike Kunes | P | 21 | 6-2 | 210 | L | L | A- | | UCLA | |
| 24 | 723 | June-Reg | Brian Wilson | P | 21 | 6-1 | 205 | R | R | MLB | 2006-2009 | Louisiana State University | |
| 25 | 753** | June-Reg | Nolan Mulligan | P | 18 | 6-5 | 190 | R | R | Rookie | | Chaminade-Madonna (Hollywood,FL) | |
| 26 | 783 | June-Reg | Tyler Coon | P | 19 | 6-3 | 210 | L | L | College | | College of Southern Nevada | |
| 27 | 813** | June-Reg | Omar Aguilar | P | 18 | 6-1 | 190 | L | R | AA | | Livingston (Livingston,CA) | |
| 28 | 843 | June-Reg | Tony Gonzalez | OF | 19 | 6-5 | 212 | R | R | Ind | | Sunny Hills (Fullerton,CA) | |
| 29 | 873 | June-Reg | Daniel DeSouza | OF | 18 | 6-1 | 175 | L | L | Rookie | | Connors State College | |
| 30 | 903 | June-Reg | Derek Barrows | 3B | 22 | 6-1 | 187 | R | R | A | | Campbell University | |
| 31 | 933 | June-Reg | Eduardo Baeza | P | 18 | 6-0 | 180 | R | R | A+ | | Mission College | |
| 32 | 963** | June-Reg | O.D. Gonzalez | OF | 18 | 6-1 | 180 | R | R | A | | American (Hialeah,FL) | |
| 33 | 993 | June-Reg | Travis NeSmith | P | 21 | 6-3 | 225 | L | L | A- | | Florida Atlantic University | |
| 34 | 1023 | June-Reg | Cody McAllister | P | 19 | 6-2 | 190 | R | R | A+ | | Edmonds Community College | |
| 35 | 1053** | June-Reg | Tyson Brummett | P | 18 | 6-2 | 180 | R | R | AAA | | Spanish Fork (Spanish Fork,UT) | |
| 36 | 1083 | June-Reg | Tim Alvarez | P | 22 | 6-4 | 235 | L | L | A+ | | Southeast Missouri State University | |
| 37 | 1113** | June-Reg | Shannon Wirth | P | 19 | 6-1 | 195 | R | R | A+ | | Mount Hood Community College | |
| 38 | 1143 | June-Reg | Jordan Hafer | 1B | 18 | 6-2 | 200 | B | L | College | | Deerfield Beach (Deerfield Beach,FL) | |
| 39 | 1173 | June-Reg | Mike Pierce | C | 19 | 6-3 | 185 | R | R | AA | | Fresno City College | |
| 40 | 1203 | June-Reg | Dylan Gonzalez | P | 18 | 6-3 | 175 | R | R | A | | American Heritage (Plantation,FL) | |
| 41 | 1232 | June-Reg | Mike Johnston | P | 21 | 6-2 | 190 | L | L | College | | Ball State University | |
| 42 | 1261** | June-Reg | Luis Martinez | C | 18 | 6-0 | 210 | R | R | AAA | | Coral Park (Miami,FL) | |
| 43 | 1289** | June-Reg | Mike Bell | C | 18 | 5-11 | 175 | R | R | AA | | Red Bluff (Red Bluff,CA) | |
| 44 | 1317 | June-Reg | John Odom | P | 21 | 6-2 | 185 | R | R | A | | Tallahassee Community College | |
| 45 | 1344 | June-Reg | James Braden | P | 19 | 6-1 | 175 | R | R | - | | State College of Florida, Manatee-Sarasota | |
| 46 | 1371 | June-Reg | Brandon Federici | P | 18 | 200 | | L | L | - | | Polk State College | |
| 47 | 1398 | June-Reg | Thomas Correa | SS | 17 | 5-8 | 165 | R | R | - | | Florin (Sacramento,CA) | |
| 48 | 1425 | June-Reg | Matt Berezay | OF | 19 | 5-11 | 190 | B | R | AA | | Modesto Junior College | |
| 49 | 1451** | June-Reg | Doug Fister | P | 19 | 6-8 | 185 | L | R | MLB | 2009-2009 | Merced College | $0 |
| 50 | 1477 | June-Reg | Jim Popp | P | 22 | 6-4 | 190 | R | R | Ind | | Duquesne University | |