| 3 | 85 | June-Reg | Tim Moss | 2B | 21 | 5-11 | 180 | R | R | AA | | University of Texas | $440,000 |
| 4 | 115 | June-Reg | Michael Bourn | OF | 20 | 5-11 | 180 | L | R | MLB | 2006-2009 | University of Houston | $299,000 |
| 5 | 145 | June-Reg | Javon Moran | OF | 20 | 5-11 | 175 | R | R | AAA | | Auburn University | $175,000 |
| 6 | 175** | June-Reg | Jordan Parraz | P | 18 | 6-3 | 190 | R | R | AAA | | Green Valley (Henderson,NV) | |
| 7 | 205 | June-Reg | Kyle Kendrick | P | 18 | 6-3 | 185 | R | R | MLB | 2007-2009 | Mount Vernon (Mount Vernon,WA) | $135,000 |
| 8 | 235 | June-Reg | Matt Linder | P | 18 | 6-4 | 190 | R | R | Rookie | | Sir Winston Churchill (Thunder Bay,ON) | $90,000 |
| 9 | 265 | June-Reg | Jason Crosland | 3B | 20 | 6-2 | 215 | R | R | A | | Lamar Community College | $70,000 |
| 10 | 295 | June-Reg | Matt Hopper | 1B | 23 | 6-4 | 210 | R | R | A | | University of Nebraska | $10,000 |
| 11 | 325** | June-Reg | Myron Leslie | 3B | 21 | 6-3 | 210 | B | R | AA | | University of South Florida | |
| 12 | 355 | June-Reg | Kyle Parcus | P | 21 | 6-3 | 190 | L | L | AA | | Texas A&M University | |
| 13 | 385 | June-Reg | Joe Wilson | P | 20 | 6-3 | 190 | L | L | A | | University of Maryland-Baltimore County | |
| 14 | 415 | June-Reg | Chico Cortez | C | 22 | 6-1 | 215 | B | R | A | | Pomona-Pitzer Colleges | |
| 15 | 445 | June-Reg | Joe Brunink | 1B | 21 | 6-2 | 200 | L | R | A- | | Grand Valley State University | |
| 16 | 475 | June-Reg | Nathan Cabrera | P | 20 | 6-5 | 240 | R | R | A | | Trinidad State Junior College | |
| 17 | 505 | June-Reg | Derek Griffith | P | 20 | 6-6 | 205 | L | L | A+ | | Birmingham-Southern College | |
| 18 | 535** | June-Reg | Rob Johnson | C | 19 | 6-0 | 195 | R | R | MLB | 2007-2009 | Saddleback College | |
| 19 | 565 | June-Reg | Joe Diefenderfer | P | 22 | 6-0 | 170 | L | L | A- | | Santa Clara University | |
| 20 | 595 | June-Reg | Brad Ziegler | P | 23 | 6-4 | 200 | R | R | MLB | 2008-2009 | Missouri State University | |
| 21 | 625 | June-Reg | Caleb McConnell | P | 22 | 6-4 | 210 | R | R | A- | | University of Louisiana-Monroe | |
| 22 | 655 | June-Reg | Marc Tugwell | 2B | 22 | 6-0 | 190 | R | R | AAA | | Virginia Tech | |
| 23 | 685 | June-Reg | Charlie Waite | C | 22 | 6-1 | 182 | R | R | College | | University of Mississippi | |
| 24 | 715 | June-Reg | J.D. Foust | OF | 22 | 6-5 | 210 | R | R | A- | | University of Toledo | |
| 25 | 745 | June-Reg | C.J. Woodrow | P | 21 | 6-3 | 200 | R | R | A+ | | University of Minnesota | |
| 26 | 775 | June-Reg | Daniel Hodges | P | 22 | 6-0 | 180 | L | L | A | | Florida State University | |
| 27 | 805 | June-Reg | Brad Overton | P | 22 | 6-2 | 195 | R | R | A | | University of North Carolina at Wilmington | |
| 28 | 835 | June-Reg | Blair Erickson | P | 18 | 6-1 | 205 | R | R | A+ | | Jesuit (Carmichael,CA) | |
| 29 | 865 | June-Reg | Justin Cerrato | P | 21 | 6-2 | 205 | R | R | A+ | | University of North Florida | |
| 30 | 895 | June-Reg | Ryan Harris | SS | 17 | 6-0 | 170 | B | R | - | | Eisenhower (Rialto,CA) | |
| 31 | 925 | June-Reg | Matt Padilla | P | 21 | 6-3 | 230 | R | R | A- | | American River College | |
| 32 | 955 | June-Reg | Jake Tompkins | P | 23 | 5-11 | 190 | R | R | A+ | | Louisiana State University | |
| 33 | 985 | June-Reg | Justin Libey | P | 22 | 6-5 | 215 | R | R | A | | Manchester College | |
| 34 | 1015 | June-Reg | Justin Riley | C | 22 | 5-11 | 205 | R | R | A- | | North Carolina State University | |
| 35 | 1045 | June-Reg | Jason Pritchard | P | 22 | 6-9 | 225 | R | R | - | | Baylor University | |
| 36 | 1075 | June-Reg | Brett Amyx | 3B | 18 | 6-6 | 230 | R | R | Ind | | Coppell (Coppell,TX) | |
| 37 | 1105 | June-Reg | Jesse Torborg | OF | 20 | 6-1 | 210 | R | R | Rookie | | Suffolk County Community College | |
| 38 | 1135 | June-Reg | Edgar Mercado | SS | 19 | 6-2 | 176 | R | R | - | | Stoneman Douglas (Parkland,FL) | |
| 39 | 1165 | June-Reg | Edward Romero | P | 17 | 5-11 | 180 | L | L | - | | Central (Fresno,CA) | |
| 40 | 1195 | June-Reg | Andy Barb | C | 18 | 6-3 | 205 | R | R | A+ | | Juanita (Kirkland,WA) | |
| 41 | 1225 | June-Reg | Greg Reynolds | P | 17 | 6-7 | 225 | R | R | MLB | 2008-2008 | Terra Nova (Pacifica,CA) | |
| 42 | 1254 | June-Reg | Matt Lambeth | OF | 19 | 6-3 | 205 | R | R | College | | Mesa Community College | |
| 43 | 1283 | June-Reg | Cole Buchanan | P | 18 | 6-2 | 165 | L | L | - | | Santiago (Corona,CA) | |
| 44 | 1311 | June-Reg | Cal Stanke | P | 18 | 6-0 | 180 | R | R | A | | St. Mary Central (Neenah,WI) | |
| 45 | 1338 | June-Reg | Jerod Estey | OF | 18 | 6-2 | 190 | L | L | - | | Moffat County (Craig,CO) | |
| 46 | 1365** | June-Reg | Ryan Tabor | P | 18 | 6-3 | 170 | L | L | College | | Green Valley (Henderson,NV) | |
| 47 | 1392 | June-Reg | Michael Crotta | P | 18 | 6-6 | 210 | R | R | AA | | Martin County (Stuart,FL) | |
| 48 | 1419 | June-Reg | Kyle Nash | P | 18 | 6-3 | 190 | R | R | - | | Mater Dei (Santa Ana,CA) | |
| 49 | 1445 | June-Reg | Adam Sorgi | SS | 18 | 6-1 | 180 | L | R | A- | | Capistrano Valley (Mission Viejo,CA) | |
| 50 | 1471 | June-Reg | Tad Reida | SS | 18 | 6-0 | 185 | R | R | College | | Western (Kokomo,IN) | |