| 2 | 57 | June-Reg | Jon Lester | P | 18 | 6-3 | 200 | L | L | MLB | 2006-2009 | Bellarmine Prep (Tacoma,WA) | $1,000,000 |
| 3 | 88 | June-Reg | Scott White | 3B | 18 | 6-3 | 220 | R | R | A+ | | Walton (Marietta,GA) | |
| 4 | 118 | June-Reg | Chris Smith | P | 21 | 6-2 | 191 | R | R | MLB | 2008-2009 | University of California-Riverside | |
| 5 | 148 | June-Reg | Chad Spann | 3B | 18 | 6-1 | 190 | R | R | AAA | | Southland Academy (Americus,GA) | |
| 6 | 178** | June-Reg | Barret Browning | P | 17 | 6-1 | 170 | L | L | AA | | Wayne County (Jesup,GA) | |
| 7 | 208** | June-Reg | Jason Neighborgall | P | 18 | 6-5 | 212 | R | R | A | | Riverside (Durham,NC) | |
| 8 | 238 | June-Reg | Brandon Moss | 2B | 18 | 6-0 | 180 | L | R | MLB | 2007-2009 | Loganville (Loganville,GA) | |
| 9 | 268 | June-Reg | Tyler Pelland | P | 18 | 6-0 | 190 | R | L | AAA | | Mount Abraham (Bristol,VT) | |
| 10 | 298 | June-Reg | Greg Stone | IF | 21 | 6-0 | 180 | R | R | A+ | | Bacone College | |
| 11 | 328 | June-Reg | Mike Goss | OF | 21 | 5-11 | 185 | L | R | AA | | Jackson State University | |
| 12 | 358** | June-Reg | Dustin Majewski | OF | 20 | 5-11 | 190 | L | L | AAA | | University of Texas | |
| 13 | 388 | June-Reg | Clay Stone | P | | | 0 | | | - | | Ruston (Ruston,LA) | |
| 14 | 418 | June-Reg | John Priola | P | 22 | 6-3 | 190 | R | R | A | | Faulkner University | |
| 15 | 448 | June-Reg | Ian Cronkhite | OF | 18 | 6-1 | 180 | L | L | AA | | Westmoore (Oklahoma City,OK) | |
| 16 | 478 | June-Reg | Peter Ciofrone | 2B | 18 | 5-11 | 190 | L | R | AAA | | Smithtown (Nesconset,NY) | |
| 17 | 508 | June-Reg | Arian Alcala | 3B | 22 | 6-2 | 205 | R | R | A | | St Thomas (St Thomas) | |
| 18 | 538 | June-Reg | Robert Smith | OF | | | 0 | | | - | | Southeast Missouri State University | |
| 19 | 568 | June-Reg | Tom MacLane | P | 22 | 5-11 | 170 | L | L | A | | Florida Atlantic University | |
| 20 | 598 | June-Reg | Luis Villarreal | P | 22 | 6-1 | 208 | L | L | AAA | | Northwood University | |
| 21 | 628 | June-Reg | Alberto Concepcion | C-3B | 21 | 6-1 | 220 | R | R | AAA | | USC | |
| 22 | 658 | June-Reg | John Anderson | | | | | | | College | | Arkansas State University | |
| 23 | 688 | June-Reg | Dave Pahucki | P | 21 | 6-2 | 200 | R | R | AA | | Siena College | |
| 24 | 718 | June-Reg | Patrick Boran | IF | 21 | 6-2 | 200 | R | R | A+ | - | Princeton University | |
| 25 | 748 | June-Reg | Jim Buckley | C | 22 | 6-1 | 230 | R | R | AAA | | Siena College | |
| 26 | 778** | June-Reg | Adam Davis | P | 18 | 6-3 | 200 | R | R | - | | Metter (Pulaski,GA) | |
| 27 | 808 | June-Reg | Mike Armstrong | P | 16 | 6-5 | 230 | R | R | College | | Chabot College | |
| 28 | 838 | June-Reg | Mike Barclay | OF | 22 | 6-3 | 177 | R | R | A+ | | University of South Florida | |
| 29 | 868** | June-Reg | Matt Clarkson | C | 18 | 6-1 | 190 | L | R | A- | | Broken Arrow (Broken Arrow,OK) | |
| 30 | 898 | June-Reg | Jonathan Williams | P | | | 0 | | | - | | Opelika (Opelika,AL) | |
| 31 | 928 | June-Reg | Steve Boggs | CF | 18 | 5-10 | 170 | R | R | A- | | San Diego (San Diego,CA) | |
| 32 | 958 | June-Reg | Brock Hunton | P | | | 0 | | | Ind | | Dublin Coffman (Dublin,OH) | |
| 33 | 988 | June-Reg | Luke Taylor | P | | | 0 | | | - | | Lowndes (Valdosta,GA) | |
| 34 | 1018** | June-Reg | Mitchell Woolf | P | 18 | 6-3 | 170 | R | R | College | | Madison (Rexburg,ID) | |
| 35 | 1048 | June-Reg | Jose Vaquedano | P | 20 | 6-4 | 175 | R | R | AAA | | Vernon College | |
| 36 | 1078** | June-Reg | Don Powers | P | 18 | 6-4 | 175 | R | R | - | | Shawnee (Shawnee,OK) | |
| 37 | 1108** | June-Reg | Ricky Romero | P | 17 | 6-1 | 195 | R | L | MLB | 2009-2009 | Roosevelt (Los Angeles,CA) | |
| 38 | 1138** | June-Reg | Koley Kolberg | P | 19 | 6-1 | 176 | R | R | A | | Navarro College | |
| 39 | 1168** | June-Reg | Tyler Jacobson | P | 19 | 6-2 | 205 | R | R | A- | | Auburn Riverside (Auburn,WA) | |
| 40 | 1198** | June-Reg | Dustin Roddy | C | 19 | 6-2 | 195 | R | R | A | | Northeast Texas Community College | |
| 41 | 1228** | June-Reg | Matt Inouye | | 18 | 5-10 | 165 | R | R | A | | Mid-Pacific Institute (Honolulu,HI) | |
| 42 | 1258** | June-Reg | Rosalino Valenzuela | P | 18 | 6-2 | 165 | R | R | - | | Marcos de Niza (Tempe,AZ) | |
| 43 | 1287 | June-Reg | Lance Schartz | C | 19 | 6-0 | 215 | R | R | A | | Garden City Community College | |
| 44 | 1315 | June-Reg | David Baker | C | 18 | 6-1 | 195 | R | R | College | | Rogers (Puyallup,WA) | |
| 45 | 1342** | June-Reg | Brian Bannister | P | 21 | 6-1 | 207 | R | R | MLB | 2006-2009 | USC | |
| 46 | 1369 | June-Reg | Douglas Harris | P | | | 0 | | | - | | Lone Oak (Paducah,Ky) | |
| 47 | 1395 | June-Reg | Anthony Bianucci | OF | 21 | 5-11 | 180 | B | R | Rookie | | Daytona State College | |
| 48 | 1421 | June-Reg | Sergio Roman | C | | | 0 | | | - | | Allen County Community College | |
| 49 | 1447 | June-Reg | Robert Caruso | 1B | | | 0 | | | - | | Chaminade-Madonna (Hollywood,FL) | |
| 50 | 1471 | June-Reg | Seth Dhaenens | SS | 18 | 6-2 | 175 | L | R | A | | Mountain Pointe (Phoenix,AZ) | |