| 1 | 23 | June-Reg | Jeff Francoeur | OF | 18 | 6-4 | 200 | R | R | MLB | 2005-2009 | Parkview (Liburn,GA) | $2,200,000 |
| 1 | 34 | June-Reg | Dan Meyer | P | 20 | 6-3 | 190 | R | L | MLB | 2004-2009 | James Madison University | $1,000,000 |
| 2 | 64 | June-Reg | Brian McCann | C | 18 | 6-3 | 190 | L | R | MLB | 2005-2009 | Duluth (Duluth,GA) | $750,000 |
| 2 | 65 | June-Reg | Tyler Greene | SS | 18 | 6-2 | 185 | R | R | MLB | 2009-2009 | St. Thomas Aquinas (Fort Lauderdale,FL) | |
| 3 | 95 | June-Reg | Charlie Morton | P | 18 | 6-4 | 190 | R | R | MLB | 2008-2009 | Joel Barlow (Redding,CT) | $415,000 |
| 4 | 125 | June-Reg | Steve Russell | P | 18 | 6-6 | 180 | R | R | A+ | | Cimarron Memorial (Las Vegas,NV) | |
| 5 | 155 | June-Reg | Kris Harvey | C | 18 | 6-2 | 195 | R | R | AA | | Bandys School (Catawba,NC) | |
| 6 | 185 | June-Reg | James Jurries | IF | 23 | 6-0 | 195 | R | R | AAA | | Tulane University | |
| 7 | 215 | June-Reg | Pat Clayton | P | 17 | 6-4 | 225 | R | R | A- | | Walton (Marietta,GA) | |
| 8 | 245 | June-Reg | Jon Schuerholz | SS | 22 | 5-11 | 180 | R | R | AAA | | Auburn University | |
| 9 | 275 | June-Reg | Nick Starnes | P | 18 | 6-3 | 200 | R | R | Ind | | Graham (Graham,NC) | |
| 10 | 305 | June-Reg | Yaron Peters | 1B | 22 | 6-2 | 224 | R | R | A+ | | University of South Carolina | |
| 11 | 335 | June-Reg | Mike Grasso | 2B | 22 | 6-0 | 170 | R | R | A | | Albany (Albany,NY) | |
| 12 | 365 | June-Reg | Wes Timmons | IF | 22 | 6-0 | 190 | R | R | AAA | | Bethune-Cookman University | |
| 12 | 370 | June-Reg | Keoni DeRenne | IF | 23 | 5-7 | 165 | B | R | AAA | | University of Arizona | |
| 13 | 395 | June-Reg | Daniel Mead | P | 20 | 6-4 | 190 | R | L | Ind | | State College of Florida, Manatee-Sarasota | |
| 14 | 425 | June-Reg | Michael Reiss | P | 19 | 6-5 | 190 | R | R | Rookie | | Seminole Community College | |
| 15 | 455 | June-Reg | J.P. Lowen | C | 18 | 6-2 | 225 | L | R | A | | Lassiter (Marietta,GA) | |
| 16 | 485 | June-Reg | Mike Mueller | P | 21 | 6-5 | 220 | R | R | A+ | | Auburn University | |
| 17 | 515 | June-Reg | Brad David | P | 22 | 6-0 | 190 | L | L | A+ | | Louisiana State University | |
| 18 | 545 | June-Reg | Josh Adams | P | 22 | 6-5 | 190 | L | L | Rookie | | Franklin College | |
| 19 | 575 | June-Reg | Fernando Tadefa | P | 22 | 6-0 | 200 | L | L | Rookie | | St. Mary's University | |
| 20 | 605 | June-Reg | Chuck James | P | 20 | 6-0 | 170 | L | L | MLB | 2005-2008 | Chattahoochee Valley Community College | |
| 21 | 635 | June-Reg | James Parker | P | | | 0 | | | - | | Sonoma State University | |
| 22 | 665 | June-Reg | Trey Shields | P | 18 | 6-6 | 225 | R | R | A | | Bay (Panama City,FL) | |
| 23 | 695** | June-Reg | Tim Cunningham | P | 21 | 6-3 | 195 | L | L | A | | Stanford University | |
| 24 | 725 | June-Reg | Paul Bush | P | 22 | 6-1 | 190 | R | R | AAA | | Georgia Southwestern State University | |
| 25 | 755 | June-Reg | Steve Reiss | | 19 | 6-5 | 190 | R | R | Rookie | | Seminole Community College | |
| 26 | 785 | June-Reg | Chris Maher | P | | | 0 | | | - | | Pensacola Junior College | |
| 27 | 815 | June-Reg | T.J. Stanton | P | 21 | 6-4 | 230 | L | R | A | | Lake City Community College | |
| 28 | 845 | June-Reg | Devin Anderson | P | 18 | 6-5 | 220 | L | L | A+ | | West Orange (Winter Garden,FL) | |
| 29 | 875** | June-Reg | Mark Wagner | | 18 | 6-1 | 205 | R | R | AAA | | Mayfair (Lakewood,CA) | |
| 30 | 905 | June-Reg | Cooper Osteen | SS | 19 | 5-10 | 170 | B | R | A | | Indian River State College | |
| 31 | 935 | June-Reg | Brandon Nall | P | 20 | 6-4 | 190 | R | R | AA | | Wallace Community College | |
| 32 | 965** | June-Reg | Darrell Qualls | 3B | 18 | 6-2 | 200 | R | R | Rookie | | Middleburg (Middleburg,FL) | $0 |
| 33 | 995 | June-Reg | Jacob Eckley | P | 19 | 6-4 | 210 | L | L | Rookie | | Burke (Omaha,NE) | |
| 34 | 1025** | June-Reg | Ryan Patterson | H | 19 | 5-11 | 205 | R | R | AA | | Texarkana College | |
| 35 | 1055** | June-Reg | Kenneth Brock | P | 19 | 6-1 | 220 | L | L | Rookie | | Lane College | |
| 36 | 1085 | June-Reg | Buzz Vargas | P | 18 | 6-6 | 225 | R | R | A | | Bay City (Bay City,TX) | |
| 37 | 1115 | June-Reg | Matt Dale | P | | | 0 | | | College | | Walton (Marietta,GA) | |
| 38 | 1145 | June-Reg | Jeffrey Timmons | C | 19 | 6-1 | 195 | R | R | A- | | State College of Florida, Manatee-Sarasota | |
| 39 | 1175 | June-Reg | Brett Young | 1B | 20 | 6-4 | 230 | L | R | - | | Gloucester County College | |
| 40 | 1205** | June-Reg | Kevin Kotch | C | 17 | 6-4 | 235 | L | R | A- | | Middlesex (Middlesex,NJ) | |
| 41 | 1235 | June-Reg | David Hayes | P | | | 0 | | | College | | American Heritage (Plantation,FL) | |
| 42 | 1265** | June-Reg | Ryan Paul | P | 17 | 6-6 | 225 | L | L | A+ | | Moorpark (Moorpark,CA) | |
| 43 | 1294 | June-Reg | Ken Livesley | P | | | 0 | | | - | | Cosumnes River College | |
| 44 | 1322 | June-Reg | Christopher Tyndall | P | | | 0 | | | - | | Armstrong (Armstrong,IL) | |
| 45 | 1349 | June-Reg | Danny Collins | P | 19 | 6-3 | 175 | L | L | Rookie | | Indian River State College | |
| 46 | 1376 | June-Reg | Brandon Judge | P | | | 0 | | | - | | Santa Margarita Catholic (Rancho Santa Margarita,CA) | |
| 47 | 1402 | June-Reg | Richard Aguilar | | 19 | | | | | Rookie | | Cypress College | |
| 48 | 1428 | June-Reg | Christopher Widing | P | | | 0 | | | College | | East Paulding (Dallas,GA) | |
| 49 | 1453 | June-Reg | Christopher Dunbar | LF | | | 0 | | | - | | La Conner (Camana Island,WA) | |
| 50 | 1477 | June-Reg | Matt Handley | P | 19 | 6-2 | 200 | L | L | A+ | | Greater Atlanta Christian (Norcross,GA) | |