| 1 | 6 | June-Reg | Rocco Baldelli | OF | 18 | 6-4 | 183 | R | R | MLB | 2003-2009 | Bishop Hendricken (Warwick,RI) | $2,250,000 |
| 5 | 136 | June-Reg | Jace Brewer | SS | 21 | 6-0 | 170 | R | R | AAA | - | Baylor University | $450,000 |
| 6 | 166 | June-Reg | Dan Massiatte | C | 21 | 5-11 | 181 | R | R | AAA | | University of Louisiana at Lafayette | $30,000 |
| 7 | 196 | June-Reg | Mike Krga | SS | 17 | 6-2 | 170 | R | R | A+ | | St. Ignatius (Chicago,IL) | $162,500 |
| 8 | 226 | June-Reg | Mark Malaska | P | 22 | 6-3 | 210 | L | L | MLB | 2003-2004 | University of Akron | $35,000 |
| 9 | 256 | June-Reg | John Dischiavo | P | 18 | 6-4 | 150 | R | R | A | | Las Vegas (Las Vegas,NV) | $80,000 |
| 10 | 286 | June-Reg | John Benedetti | P | 22 | 6-0 | 190 | R | R | AA | | Augustana College | $315,000 |
| 11 | 316 | June-Reg | Hans Smith | P | 21 | 6-9 | 265 | L | L | AA | | Fresno State University | |
| 12 | 346 | June-Reg | Kelly Eddlemon | IF | 21 | 6-2 | 181 | R | R | A+ | | Sam Houston State University | |
| 13 | 376 | June-Reg | Rich Dorman | P | 21 | 6-2 | 210 | R | R | AAA | | Corban College | |
| 14 | 406 | June-Reg | Chad Coward | P | 21 | 6-3 | 176 | R | R | AA | | Guilford College | |
| 15 | 436 | June-Reg | Nate Dion | OF | 18 | 6-3 | 175 | R | R | A | | Yukon (Yukon,OK) | |
| 16 | 466 | June-Reg | James Shields | P | 18 | 6-3 | 190 | R | R | MLB | 2006-2009 | Hart (Newhall,CA) | |
| 17 | 496 | June-Reg | Adam Bonner | OF | 19 | 6-5 | 206 | L | R | A+ | | Jefferson State Community College | |
| 18 | 526 | June-Reg | Matthew Martunas | P | 21 | 6-2 | 180 | L | L | A- | | Presbyterian (Presbyterian) | |
| 19 | 556 | June-Reg | Brian Lockwood | P | 19 | 6-2 | 170 | R | R | AA | | Los Angeles Harbor College | |
| 20 | 586 | June-Reg | Nick Lyon | P | 21 | 6-5 | 190 | R | R | A- | | UCLA | |
| 21 | 616 | June-Reg | Mark Weinmunson | | | | | | | College | | De La Salle (New Orleans,LA) | |
| 22 | 646 | June-Reg | Jason Marsh | C | 22 | 6-2 | 189 | R | R | A | - | University of North Carolina-Greensboro | |
| 23 | 676 | June-Reg | Julius Anderson | P | 20 | 6-5 | 180 | R | R | A- | | Bishop State Community College | |
| 24 | 706 | June-Reg | Shawn Riggans | C | 19 | 6-2 | 190 | R | R | MLB | 2006-2009 | Indian River State College | |
| 25 | 736 | June-Reg | Elliott Shaw | P | 20 | 6-3 | 210 | R | R | Ind | | San Jose City College | |
| 26 | 766** | June-Reg | Ryan Mulhern | OF | 19 | 6-2 | 200 | R | R | AAA | | Trinidad State Junior College | |
| 27 | 796 | June-Reg | Alex Marconi | C | 22 | 6-0 | 180 | R | R | AAA | | Kent State University | |
| 28 | 826 | June-Reg | Benito Gomez | P | 21 | 6-3 | 197 | R | L | A | | Laredo Community College | |
| 29 | 856 | June-Reg | John Hill | | | | | | | A- | | University of Mississippi | |
| 30 | 886 | June-Reg | Edgar Gonzalez | IF | 22 | 6-0 | 174 | R | R | MLB | 2008-2009 | University of San Diego | |
| 31 | 916** | June-Reg | Danny Muegge | | 19 | 6-5 | 175 | L | R | AA | | McLennan Community College | |
| 32 | 946** | June-Reg | Taylor George | P | 17 | 6-2 | 190 | R | R | Ind | | Poly (Long Beach,CA) | |
| 33 | 976 | June-Reg | Keeyon Sanders | CF | | | 0 | | | - | | Belaire (Baton Rouge,LA) | |
| 34 | 1006** | June-Reg | Nick Blackburn | P | 18 | 6-4 | 230 | R | R | MLB | 2007-2009 | Del City (Oklahoma City,OK) | |
| 35 | 1036** | June-Reg | Brett Davis | 1B | 18 | 6-4 | 175 | L | L | - | | Lovejoy (Hampton,GA) | |
| 36 | 1066** | June-Reg | Colt Morton | C | 18 | 6-5 | 225 | R | R | MLB | 2007-2008 | Kings Academy (West Palm Beach,FL) | |
| 37 | 1096** | June-Reg | Shane Costa | OF | 18 | 6-1 | 205 | L | R | MLB | 2005-2007 | Golden West (Visalia,CA) | |
| 38 | 1126** | June-Reg | Steven Jackson | P | 18 | 6-5 | 215 | R | R | MLB | 2009-2009 | Summerville (Summerville,SC) | |
| 39 | 1156** | June-Reg | Griffin Zarbough | | 18 | 6-3 | 241 | L | L | Ind | | Wallace Community College | |
| 40 | 1186 | June-Reg | Jason Habel | LF | 19 | 6-3 | 200 | R | R | Rookie | | City College (Baltimore,MD) | |
| 41 | 1215 | June-Reg | Jon Dobyns | P | 18 | 6-2 | 210 | R | R | A | | Desert Vista (Phoenix,AZ) | |
| 42 | 1244** | June-Reg | Edwar Gonzalez | OF | 17 | 5-10 | 200 | R | R | AA | | South Miami (Miami,FL) | |
| 43 | 1273** | June-Reg | Vince Davis | | 17 | 6-6 | 245 | R | L | Ind | | Harlan (Chicago,IL) | |
| 44 | 1301** | June-Reg | Micah Hoffpauir | RF | 20 | 6-3 | 185 | L | L | MLB | 2008-2009 | Lon Morris College | $0 |
| 45 | 1327** | June-Reg | Luke Scott | OF | 22 | 6-0 | 210 | L | R | MLB | 2005-2009 | Oklahoma State University | |
| 46 | 1352** | June-Reg | Curtis White | P | 19 | 5-11 | 180 | L | L | College | | Seward County Community College | |
| 47 | 1376 | June-Reg | Juan Renteria | P | 20 | 5-11 | 190 | B | R | A+ | | Driscoll (Driscoll,TX) | |
| 48 | 1397 | June-Reg | Chad Christy | CF | | 6-1 | 190 | B | R | - | | Trinidad State Junior College | |
| 49 | 1417 | June-Reg | Andy Martin | P | 18 | 6-3 | 215 | L | L | College | | Univ. of San Diego (Univ. of San Diego) | |
| 50 | 1437 | June-Reg | Corey Hicks | P | | | 0 | | | - | | Lakewood (Lakewood,CA) | |