| 3 | 103 | June-Reg | Darryl Conyer | OF | 18 | 5-10 | 200 | L | L | Rookie | | Mission Bay (San Diego,CA) | |
| 4 | 133 | June-Reg | Javier Lopez | P | 20 | 6-4 | 225 | L | L | MLB | 2003-2009 | University of Virginia | |
| 5 | 163 | June-Reg | J.D. Closser | C | 18 | 5-10 | 200 | B | R | MLB | 2004-2006 | Alexandria (Alexandria,IN) | |
| 6 | 193 | June-Reg | Brock McCarty | OF | 18 | 6-2 | 205 | R | R | Rookie | | Ouachita Christian School (Monroe,LA) | |
| 7 | 223 | June-Reg | Jeffrey Pass | P | 18 | 6-1 | 168 | L | L | A | | New Castle (New Castle,IN) | |
| 8 | 253 | June-Reg | Andrew Good | P | 18 | 6-2 | 195 | R | R | MLB | 2003-2005 | Rochester (Rochester Hills,MI) | |
| 9 | 283** | June-Reg | Brendan Fuller | P | 17 | 6-1 | 205 | R | R | A | | Clearwater (Clearwater,FL) | |
| 10 | 313 | June-Reg | Tom Kail | OF | 18 | 6-4 | 210 | R | R | Rookie | | Baldwin (Pittsburgh,PA) | |
| 11 | 343 | June-Reg | Hector Cruz | OF-3B | 45 | 5-11 | 170 | R | R | MLB | 1973-1982 | Florida Community College | |
| 12 | 373 | June-Reg | Victor Hall | OF | 17 | 5-11 | 170 | L | L | AAA | | Monroe (North Hills,CA) | |
| 13 | 403** | June-Reg | Brian Sager | P | 18 | 6-4 | 230 | R | R | A | | Branford (Branford,CT) | |
| 14 | 433 | June-Reg | Dan Meier | OF | 20 | 6-0 | 201 | L | L | AAA | | Arizona State University | |
| 15 | 463 | June-Reg | Chris Cervantes | P | 19 | 6-1 | 165 | L | L | AAA | | Pima Community College | |
| 16 | 493 | June-Reg | Heath Corbett | OF | 18 | 6-4 | 195 | R | R | Rookie | | McMinn County (Athens,TN) | |
| 17 | 523 | June-Reg | Lamar Sturdivant | OF | | | 0 | | | - | | Woodbury (Woodbury,NJ) | |
| 18 | 553 | June-Reg | Bret Prinz | P | 21 | 6-3 | 185 | R | R | MLB | 2001-2007 | Phoenix College | |
| 19 | 583 | June-Reg | Jeff Barndollar | P | 21 | 6-4 | 195 | R | R | AAA | | Saddleback College | |
| 20 | 613 | June-Reg | John Egly | 3B | 18 | 6-4 | 190 | B | R | A | | Mountain View (Mountain View,MO) | |
| 21 | 643 | June-Reg | Paul Giambalvo | P | 23 | 6-1 | 170 | R | R | Rookie | | University of South Florida | |
| 22 | 673** | June-Reg | Ryan Blake | C | 18 | 6-1 | 205 | R | R | A+ | | Glenn (Kernersville,NC) | |
| 23 | 703 | June-Reg | Rob Hammock | C | 21 | 6-0 | 190 | R | R | MLB | 2003-2008 | University of Georgia | |
| 24 | 733 | June-Reg | Troy Niehaus | P | 21 | 6-6 | 200 | L | L | Rookie | | Eastern Michigan University | |
| 25 | 763 | June-Reg | Steve Neal | 1B | 21 | 6-2 | 250 | L | L | AAA | | Pratt Community College | |
| 26 | 793** | June-Reg | Jason Reuss | OF | 18 | 6-6 | 215 | R | R | A- | | Canyon (Anaheim,CA) | |
| 27 | 823 | June-Reg | Mario Knorr | OF | 18 | 5-11 | 175 | L | R | Rookie | | El Capitan (Lakeside,CA) | |
| 28 | 853 | June-Reg | Justin Santonocito | SS | 21 | 6-1 | 195 | L | R | A | | Mercyhurst College | |
| 29 | 883 | June-Reg | Mike Koplove | P | 21 | 6-0 | 160 | R | R | MLB | 2001-2007 | University of Delaware | |
| 30 | 913** | June-Reg | Charlie Manning | P | 19 | 6-2 | 180 | L | L | MLB | 2008-2008 | Polk State College | |
| 31 | 943** | June-Reg | Carl Makowsky | P | 18 | 6-1 | 205 | R | R | A+ | | Conroe (Conroe,TX) | |
| 32 | 973** | June-Reg | Nick Glaser | P | 19 | 6-2 | 190 | R | R | A- | | Edmonds Community College | |
| 33 | 1003 | June-Reg | Horace Lawrence | P | 17 | 5-9 | 160 | L | L | A- | | El Cerrito (El Cerrito,CA) | |
| 34 | 1033 | June-Reg | Justin Kees | P | 20 | 6-1 | 190 | R | R | A+ | | Southern Illinois University | |
| 35 | 1063** | June-Reg | Russ Bayer | P | 18 | 6-4 | 210 | L | L | A | | Naperville Central (Naperville,IL) | |
| 36 | 1093 | June-Reg | James Rinne | OF | 21 | 6-3 | 215 | R | R | A+ | | University of Illinois | |
| 37 | 1123 | June-Reg | Matt White | P | | | | | R | A+ | | Western Oregon University | |
| 38 | 1153 | June-Reg | Justin Crivello | P | 19 | 5-8 | 170 | L | L | Rookie | | Edmonds Community College | |
| 39 | 1183 | June-Reg | Kirk Bolling | P | 21 | 6-3 | 185 | R | R | A | | Saddleback College | |
| 40 | 1213 | June-Reg | John Gouzd | | | | | | | College | | Fairmont (Fairmont,WV) | |
| 41 | 1243 | June-Reg | Justin Beasley | C | 22 | 6-0 | 230 | | | Rookie | | Butler University | |
| 42 | 1272 | June-Reg | Jody Fuller | P | 21 | 6-3 | 220 | R | R | AAA | | University of Tennessee | |
| 43 | 1300 | June-Reg | Adam Neubart | OF | 20 | 5-11 | 165 | R | R | AA | | Rutgers University | |
| 44 | 1325 | June-Reg | Courtney Hall | | 19 | 6-5 | 220 | R | R | Ind | | Edmonds Community College | |
| 45 | 1350** | June-Reg | Wilton Reynolds | OF | 18 | 6-4 | 190 | R | R | AAA | | Monte Vista (Spring Valley,CA) | |
| 46 | 1372** | June-Reg | Benjamin Mitchell | P | 18 | 6-3 | 205 | R | R | A- | | Scottsdale (Scottsdale,AZ) | |
| 47 | 1393 | June-Reg | Cole Saben | P | | | 0 | | | - | | Portland Lutheran (Portland,OR) | |
| 48 | 1413 | June-Reg | Bryon Gribbons | P | 18 | 6-4 | 226 | R | R | - | | Cooper City (Cooper City,FL) | |
| 49 | 1430** | June-Reg | Joseph Bunton | 3B | | | 0 | | | - | | Bell (Bell,CA) | |
| 50 | 1445 | June-Reg | Lucas Gruner | C | 18 | | 0 | | | - | | Mayfair (Lakewood,CA) | |