| 1 | 14 | June-Reg | Jeff Weaver | P | 21 | 6-5 | 200 | R | R | MLB | 1999-2009 | Fresno State University | $1,750,000 |
| 1 | 34 | June-Reg | Nate Cornejo | P | 18 | 6-5 | 200 | R | R | MLB | 2001-2004 | Wellington (Wellington,KS) | $865,000 |
| 2 | 57 | June-Reg | Brandon Inge | C | 21 | 5-11 | 185 | R | R | MLB | 2001-2009 | Virginia Commonwealth University | |
| 2 | 73 | June-Reg | Adam Pettyjohn | P | 21 | 6-3 | 190 | R | L | MLB | 2001-2008 | Fresno State University | |
| 3 | 87 | June-Reg | Tommy Marx | P | 18 | 6-7 | 200 | R | L | A+ | | Brother Rice (Bloomfield Hills,MI) | |
| 4 | 117 | June-Reg | Andres Torres | OF | 20 | 5-10 | 175 | B | R | MLB | 2002-2009 | Miami-Dade College | |
| 5 | 147 | June-Reg | Gregory Peterson | OF | | | 0 | | | - | | St. John's University | |
| 6 | 177 | June-Reg | Bobby Sismondo | P | 21 | 6-1 | 180 | L | L | AA | | Ohio University | |
| 7 | 207 | June-Reg | Clint Smith | P | 21 | 5-11 | 170 | R | R | AA | | University of Oklahoma | |
| 8 | 237 | June-Reg | Barry Tolli | OF | 18 | 6-2 | 195 | R | R | A+ | | Newbury Park (Newbury Park,CA) | |
| 9 | 267 | June-Reg | Donny Sevieri | | | | | | | College | | El Dorado (Albuquerque,NM) | |
| 10 | 297 | June-Reg | Billy Rich | OF | 21 | 6-2 | 205 | R | R | A | | University of Connecticut | |
| 11 | 327** | June-Reg | Seth Taylor | SS | 20 | 6-1 | 180 | R | R | AA | | University of South Alabama | |
| 12 | 357 | June-Reg | Russ Cleveland | C | 18 | 6-3 | 205 | R | R | AAA | | Chaparral (Las Vegas,NV) | |
| 13 | 387 | June-Reg | Lazaro Gutierrez | P | 22 | 6-2 | 195 | L | L | A | | University of Miami | |
| 14 | 417 | June-Reg | Calvin Chipperfield | P | 20 | 6-1 | 170 | R | R | AA | | Mount San Antonio College | |
| 15 | 447 | June-Reg | Cedric Brooks | C | | | 0 | | | AA | | Central (Phenix City,AL) | |
| 16 | 477** | June-Reg | Greg Sain | IF | 18 | 6-2 | 205 | R | R | AAA | | West Torrance (Torrance,CA) | |
| 17 | 507 | June-Reg | William Nelson | SS | 37 | 5-10 | 190 | R | R | - | | Santa Ana College | |
| 18 | 537** | June-Reg | Andrew Earley | P | 18 | 6-4 | 165 | R | R | A- | | Shaker Heights (Shaker Heights,OH) | |
| 19 | 567 | June-Reg | Galen Shea | P | | 6-2 | 190 | R | R | A- | | Houston Baptist University | |
| 20 | 597 | June-Reg | James Hostetler | P | 21 | 6-7 | 230 | R | R | A+ | | Fullerton College | |
| 21 | 627 | June-Reg | Nathan Forbush | C | 22 | 6-2 | 220 | B | R | A+ | | University of Utah | |
| 22 | 657 | June-Reg | Ryan Earl | P | 17 | 6-6 | 175 | L | L | A- | | Thousand Oaks (Thousand Oaks,CA) | |
| 23 | 687 | June-Reg | William Madson | P | 22 | 6-0 | 210 | R | R | A | | Carthage College | |
| 24 | 717 | June-Reg | Thomas Koutrouba | P | 20 | 6-0 | 190 | L | L | A+ | | University of Maine | |
| 25 | 747 | June-Reg | Derek Besco | | 22 | 6-2 | 200 | R | R | AAA | | University of Michigan | |
| 26 | 777 | June-Reg | Craig Daluz | 3B | 23 | 6-2 | 200 | R | R | - | | Fresno State University | |
| 27 | 807 | June-Reg | Jason Colquitt | C | 21 | 6-0 | 195 | R | R | A+ | | East Carolina University | |
| 28 | 837 | June-Reg | Lacarlo Moore | CF | 22 | 5-10 | 170 | L | R | A+ | | Xavier University | |
| 29 | 867 | June-Reg | Scott Lawson | | 19 | 6-2 | 200 | L | L | Ind | | John A. Logan College | |
| 30 | 897 | June-Reg | Keith Law | SS | 21 | 6-0 | 175 | R | R | A | | Georgia Perimeter College | |
| 31 | 927 | June-Reg | Mack Paciorek | 3B | 20 | 6-4 | 200 | R | R | Ind | | UCLA | |
| 32 | 957 | June-Reg | Ronald Bush | SS | 21 | 6-1 | 170 | R | R | A | | College of William and Mary | |
| 33 | 987 | June-Reg | Brian McGowan | P | 21 | 6-4 | 245 | R | R | A+ | | Queens College | |
| 34 | 1017** | June-Reg | Robert Stiehl | C | 17 | 6-3 | 205 | R | R | AA | | West Torrance (Torrance,CA) | |
| 35 | 1047 | June-Reg | Joseph Yingling | C | 17 | 6-1 | 185 | R | R | Rookie | | | |
| 36 | 1077 | June-Reg | Scott Stuck | P | | | 0 | | | - | | Climax Scott (Climax,MI) | |
| 37 | 1107** | June-Reg | Antoine Cameron | OF | 18 | 6-1 | 215 | L | L | A+ | | Ayala (Chino Hills,CA) | |
| 38 | 1137** | June-Reg | Edgar Varela | 3B | 17 | 6-1 | 200 | L | R | A+ | | San Gabriel (San Gabriel,CA) | |
| 39 | 1167** | June-Reg | Ryan Cox | P | 21 | 6-3 | 210 | R | R | AAA | | Southern Illinois University | |
| 40 | 1197 | June-Reg | David Mendez | P | 18 | 6-2 | 190 | L | L | A+ | | Lehman (Bronx,NY) | |
| 41 | 1227 | June-Reg | Chris Tiller | P | | | 0 | | | - | | Panola College | |
| 42 | 1257** | June-Reg | Kevin Estrada | | 17 | 6-2 | 185 | R | R | AAA | | El Segundo (El Segundo,CA) | |
| 43 | 1285 | June-Reg | Keith Perez | P | 18 | 6-2 | 200 | R | R | A+ | | Holly (Holly,MI) | |
| 44 | 1311 | June-Reg | Craig Bowser | OF | | | 0 | | | - | | Lufkin (Lufkin,TX) | |
| 45 | 1335** | June-Reg | Miles Luuloa | SS | 17 | 5-9 | 180 | B | R | A | | Malokai (Kaunakakai,HI) | |
| 46 | 1358 | June-Reg | Patrick Gil | P | | | 0 | | | - | | Grandville (Grandville,MO) | |
| 47 | 1380 | June-Reg | Warren Trott | | 18 | | | | | College | | West Torrance (Torrance,CA) | |
| 48 | 1401** | June-Reg | Chris Curry | C | 20 | 6-1 | 195 | R | R | AAA | | Meridian Community College | |