| 1 | 15 | June-Reg | Chris Carpenter | P | 18 | 6-6 | 225 | R | R | MLB | 1997-2009 | Trinity (Manchester,NH) | $580,000 |
| 1 | 37 | June-Reg | Matt Farner | OF | 18 | 6-4 | 185 | L | L | A | | East Pennsboro Area (Enola,PA) | $300,000 |
| 1 | 40 | June-Reg | Jeremy Lee | P | 18 | 6-8 | 235 | R | R | AA | | Galesburg (Galesburg,IL) | $165,000 |
| 1 | 41 | June-Reg | Mark Lukasiewicz | P | 20 | 6-7 | 240 | L | L | MLB | 2001-2002 | Brevard Community College | $250,000 |
| 2 | 47 | June-Reg | Anthony Medrano | SS | 18 | 5-10 | 175 | R | R | AAA | | David Starr Jordan (Long Beach,CA) | $157,500 |
| 2 | 57 | June-Reg | Ryan Jones | 1B | 18 | 6-3 | 225 | R | R | AAA | | Irvine (Irvine,CA) | $150,000 |
| 3 | 85 | June-Reg | Mike Romano | P | 21 | 6-2 | 195 | R | R | MLB | 1999-1999 | Tulane University | |
| 3 | 98 | June-Reg | Joe Young | P | 18 | 6-4 | 210 | R | R | AA | | Ainlay (Edmonton,AB) | |
| 4 | 126 | June-Reg | Thad Busby | C-OF | 18 | 6-3 | 215 | R | R | - | | Monsignor Pace (Miami,FL) | |
| 5 | 154 | June-Reg | Charles Bourne | SS | | | | | | A- | | Muir (Pasadena,CA) | |
| 6 | 182** | June-Reg | Rob DeBoer | OF | 22 | 5-10 | 205 | R | R | AA | | University of South Carolina | |
| 7 | 210** | June-Reg | Donny Barker | P | | 6-3 | 184 | R | R | - | | Leander (Leander,TX) | |
| 8 | 238 | June-Reg | Matt Stone | P | | | | | | Rookie | | Vista (Vista,CA) | |
| 9 | 266 | June-Reg | Oreste Volkert | P | 18 | 6-6 | 187 | R | R | A | | La Habra (La Habra,CA) | |
| 10 | 294 | June-Reg | Ruben Corral | P | 17 | 6-6 | 200 | L | R | A | | Arroyo (El Monte,CA) | |
| 11 | 322 | June-Reg | Larry Mohs | P | 18 | 6-8 | 225 | R | R | College | | Nutley (Nutley,NJ) | |
| 12 | 350 | June-Reg | Brent Coe | p | 18 | 6-4 | 187 | R | L | Rookie | | Franklin Central (Indianapolis,IN) | |
| 13 | 378 | June-Reg | Adam Melhuse | 3B | 21 | 6-2 | 185 | B | R | MLB | 2000-2008 | UCLA | |
| 14 | 406** | June-Reg | Chris Freeman | p | 20 | 6-4 | 205 | R | R | AA | | University of Tennessee | |
| 15 | 434 | June-Reg | Ty Hartshorn | p | 18 | 6-5 | 190 | R | R | AA | | Lamar (Lamar,CO) | |
| 16 | 462** | June-Reg | Shane Dennis | p | 21 | 6-3 | 200 | R | L | AAA | | Wichita State University | |
| 17 | 490 | June-Reg | Mike Johnson | p | 17 | 6-2 | 195 | L | R | MLB | 1997-2001 | Salisbury Composite (Sherwood Park,AB) | |
| 18 | 518 | June-Reg | David Morgan | C | 21 | 6-4 | 215 | R | R | AA | | Harvard University | |
| 19 | 546 | June-Reg | David Sinnes | p | 22 | 5-11 | 185 | R | R | A+ | | University of Notre Dame | |
| 20 | 574** | June-Reg | Aaron Gardin | OF | | | | | | - | | Chaparral (Scottsdale,AZ) | |
| 21 | 602** | June-Reg | Daniel Crawford | p | 18 | 6-6 | 228 | R | R | A | | Jersey Village (Houston,TX) | |
| 22 | 630 | June-Reg | Steve Johnson | OF | | | | | | - | | Michigan State University | |
| 23 | 658 | June-Reg | Rob Steinert | p | 21 | 6-3 | 195 | R | R | A+ | | North Carolina State University | |
| 24 | 686 | June-Reg | Brian Grant | p | 20 | 6-4 | 215 | L | L | A- | | Diablo Valley College | |
| 25 | 714 | June-Reg | William Daunic | 1B | | | | | | A- | | Vanderbilt University | |
| 26 | 742 | June-Reg | Vic Davila | SS | 20 | 6-0 | 185 | L | R | A+ | | Westchester Community College | |
| 27 | 770 | June-Reg | Michael Toney | p | 19 | 6-3 | 205 | R | R | A+ | | Cochise College | |
| 28 | 798 | June-Reg | John Nape | p | 20 | 6-3 | 220 | R | R | Rookie | | Lewis University | |
| 29 | 826 | June-Reg | Rob Mummau | SS | 21 | 5-11 | 185 | R | R | AAA | | James Madison University | |
| 30 | 854 | June-Reg | Richard Lutz | C | | | | | | Rookie | | Elizabethtown College | |
| 31 | 882 | June-Reg | Brad Feldewerth | p | | | | | | - | | Fort Zurnwalt North (Wentzville,MO) | |
| 32 | 910** | June-Reg | James Bowman | p | | | | | | - | | Highline (Burien,WA) | |
| 33 | 938** | June-Reg | Jon Phillips | p | 18 | 6-4 | 205 | R | R | Ind | | South Cobb (Austell,GA) | |
| 34 | 966 | June-Reg | Eric Booth | Of | | | | | | - | | Bassfield (Bassfield,MS) | |
| 35 | 994 | June-Reg | Michael Diebolt | p | 18 | 6-0 | 195 | R | L | A- | | Mayfield (Mayfield Village,OH) | |
| 36 | 1022** | June-Reg | Scott Henderson | p | 18 | 6-3 | 195 | R | R | AAA | | Villa Park (Orange,CA) | |
| 37 | 1050 | June-Reg | Christian Roggendorf | 1B | | | | | | A- | | Dowling College | |
| 38 | 1078** | June-Reg | Ryan Brannan | p | 18 | 6-3 | 210 | R | R | AAA | | Huntington Beach (Huntington Beach,CA) | |
| 39 | 1106 | June-Reg | James Smith | Of | | | | | | - | | Greensboro (Quincy,FL) | |
| 40 | 1134 | June-Reg | Adrian Poindexter | SS | | | | | | - | | Caldwell (Columbus,MS) | |
| 41 | 1162 | June-Reg | David Sumner | of | | | | | | - | | University of Pittsburgh | |
| 42 | 1190 | June-Reg | Mane Gavric | of | | | | | | - | | Mather (Chicago,IL) | |
| 43 | 1217 | June-Reg | Ivan Nobles | of | 18 | 6-1 | 170 | R | R | Rookie | | | |
| 44 | 1243** | June-Reg | David Meyer | jp | 21 | 6-5 | 215 | L | L | AA | | University of Kansas | |
| 45 | 1268 | June-Reg | Brian Haebig | p | 17 | 6-4 | 190 | R | R | - | | Sahuaro (Tucson,AZ) | |
| 46 | 1292 | June-Reg | Mark Macias | p | | | | | | - | | Ridgewood (Norridge,IL) | |
| 47 | 1316 | June-Reg | Herman Gordan | of | | | | | | - | | El Camino (Oceanside,CA) | |
| 48 | 1339 | June-Reg | Ronald Dempsey | of | | | | | | - | | Lufkin (Lufkin,TX) | |
| 49 | 1362 | June-Reg | Jason Monk | p | | | | | | - | | Mississippi Gulf Coast Community College | |
| 50 | 1384 | June-Reg | David Fogie | p | | | | | | - | | Torrance (Torrance,CA) | |
| 51 | 1404 | June-Reg | Brian Thomas | p | | | | | | - | | Mount Pleasant (Mount Pleasant,TX) | |
| 52 | 1425** | June-Reg | Joe Nelson | SS | 18 | 6-2 | 185 | R | R | MLB | 2001-2009 | Notre Dame (Alameda,CA) | |
| 53 | 1446 | June-Reg | Jaime Rogue | 2B | | | | | | - | | Vernon College | |
| 54 | 1466 | June-Reg | Jim Mann | p | 18 | 6-3 | 225 | R | R | MLB | 2000-2003 | Massasoit Community College | |
| 55 | 1486 | June-Reg | Neal Hannah | of | 18 | 6-2 | 206 | R | R | A- | | Bremen (Bremen,GA) | |
| 56 | 1505 | June-Reg | Victor Rodriguez | p | 19 | 6-4 | 190 | R | R | A- | | Northwest Florida State College | |