| 1 | 7 | June-Reg | Sam Khalifa | SS | 18 | 5-11 | 170 | R | R | MLB | 1985-1987 | Sahuaro (Tucson,AZ) | |
| 2 | 35 | June-Reg | Jim Opie | 3B | 20 | 6-2 | 192 | R | R | AAA | | University of New Orleans | |
| 3 | 61** | June-Reg | Joe Magrane | P | 17 | 6-6 | 230 | R | L | MLB | 1987-1996 | Rowan County (Morehead,KY) | |
| 4 | 87 | June-Reg | Charles Marty | P | | | | | | A | | Point Loma Nazarene University | |
| 5 | 113 | June-Reg | Shawn Stone | P | | | | | | A+ | | Grossmont College | |
| 6 | 139 | June-Reg | Mitch McKelvey | P | | | | | | AA | | Groveton (Alexandria,VA) | |
| 7 | 165 | June-Reg | Brian DeValk | OF | | | | | | A+ | | University of New Orleans | |
| 8 | 191 | June-Reg | David Coss | OF | | | | | | A+ | | Centenary College | |
| 9 | 217 | June-Reg | Tom Bryant | 3B | | | | | | - | | Caldwell (Caldwell,NJ) | |
| 10 | 243 | June-Reg | David Frederick | OF | | | | | | A | | Anderson University | |
| 11 | 269 | June-Reg | Tony Bagwell | 3B-SS | | | | | | - | | Shorter College | |
| 12 | 295** | June-Reg | Ray Hayward | p | 21 | 6-1 | 190 | L | L | MLB | 1986-1988 | University of Oklahoma | |
| 13 | 320 | June-Reg | Barry Shiflett | 1B | | | | | | - | | Western Albemarle (Crozet,VA) | |
| 14 | 346 | June-Reg | Shawn Holman | p | 17 | 6-2 | 185 | R | R | MLB | 1989-1989 | Ambridge Area (Ambridge,PA) | |
| 15 | 372** | June-Reg | Bob D'Agostino | p | 20 | 6-6 | 220 | R | R | A- | | University of Louisiana at Lafayette | |
| 16 | 398 | June-Reg | Andy Watson | IF | | | | | | A | | Centenary College | |
| 17 | 424** | June-Reg | Bryant Robertson | OF | | | | | | A- | | Hillcrest (Country Club Hills,IL) | |
| 18 | 450 | June-Reg | Justin Catlett | p | | | | | | A | | Meridian (Meridian,MS) | |
| 19 | 476 | June-Reg | Bernard Stanton | p | | | | | | A | | Stillman College | |
| 20 | 502** | June-Reg | Mike Patton | p | | | | | | - | | Seton Hall University | |
| 21 | 527 | June-Reg | James Smith | OF | | | | | | Rookie | | J.J. Kelly (Wise,VA) | |
| 22 | 552 | June-Reg | James Mims | OF | | | | | | Rookie | | Baptist College of Florida | |
| 23 | 577 | June-Reg | John Kenny | SS | | | | | | - | | Denison University | |
| 24 | 602 | June-Reg | Fred Laningham | SS | | | | | | - | | West (Bakersfield,CA) | |
| 25 | 627** | June-Reg | Michael Walker | SS | | | | | | A | | Cerritos (Cerritos,CA) | |
| 26 | 652 | June-Reg | Mark Barron | p | | | | | | - | | College of DuPage | |
| 27 | 676** | June-Reg | Ed Veres | SS | | | | | | - | | West Branch (Allport,PA) | |
| 28 | 700 | June-Reg | Randy Foster | p | | | | | | - | | Oxford (Oxford,NY) | |
| 29 | 723 | June-Reg | Jose DeLeon | p | 21 | 6-4 | 215 | R | R | MLB | 1983-1995 | Perth Amboy (Perth Amboy,NJ) | |
| 30 | 743 | June-Reg | Tom Graziano | 1B-OF | | | | | | A | | University of New Orleans | |
| 31 | 760 | June-Reg | Mark Whitman | 3B | | | | | | - | | Erwin (Asheville,NC) | |
| 32 | 776 | June-Reg | Craig Conti | OF | | | | | | - | | McDowell (Erie,PA) | |
| 33 | 786 | June-Reg | Marshall Miller | 3B | | | | | | - | | Brashear (Pittsburgh,PA) | |
| 34 | 794** | June-Reg | Tom Snowberger | Of | | | | | | A | | Sylvania Northview (Sylvania,OH) | |
| 35 | 800 | June-Reg | Allen Depew | Of | | | | | | - | | Herculaneum (Herculaneum,MO) | |
| 1 | 13 | June-Sec | Bip Roberts | SS | 18 | 5-7 | 165 | B | R | MLB | 1986-1998 | Chabot College | |
| 2 | 38 | June-Sec | Frank Russo | 1B-3b | | | | | | - | | Indian River State College | |
| 3 | 58 | June-Sec | Mike Mazzocco | OF | 20 | 6-2 | 195 | R | R | - | | College of the Canyons | |
| 4 | 71 | June-Sec | Scott Bailes | P | 19 | 6-2 | 171 | L | L | MLB | 1986-1998 | St. Louis Community College-Meramec | |
| 5 | 80 | June-Sec | Marty Freeman | 2B-OF | | | | | | AA | | Indian River State College | |
| 1 | 8 | Jan-Reg | Charles Cunningham | 3B | | | | | | A+ | | University of the Cumberlands | |
| 2 | 34** | Jan-Reg | Dennis Wood | OF | | | | | | - | | Spartanburg Methodist College | |
| 3 | 60** | Jan-Reg | Mark Barbagelata | SS | | | | | | A- | | College of Southern Idaho | |
| 4 | 86 | Jan-Reg | Tim Grachen | P | | | | | | A+ | | Fullerton College | |
| 5 | 112** | Jan-Reg | Mike Santiago | P | | | | | | AA | | Mount San Antonio College | |
| 6 | 138** | Jan-Reg | Jamie Brisco | P | 20 | 6-4 | 225 | R | R | AA | | Fresno City College | |
| 7 | 163 | Jan-Reg | Michael Wood | P | | | | | | - | | Frederick Community College | |
| 8 | 188** | Jan-Reg | Richard Borowski | 3B | | | | | | A | | Erie Community College | |
| 9 | 212 | Jan-Reg | Al Hamilton | 3B | 19 | 6-2 | 180 | R | R | A+ | | Crowder College | |
| 10 | 232 | Jan-Reg | Robert Kline | P | | | | | | A- | | Hagerstown Community College | |
| 11 | 250 | Jan-Reg | Gary Grudzinski | P | | | | | | A+ | | Lackawanna College | |
| 1 | 4 | Jan-Sec | Burk Goldthorn | OF | 23 | 6-3 | 195 | L | R | AAA | | University of Texas | |
| 2 | 29 | Jan-Sec | Benny Distefano | 1B | 20 | 6-1 | 195 | L | L | MLB | 1984-1992 | Alvin Community College | |
| 3 | 48** | Jan-Sec | Tim Barker | 2B | | | | | | A+ | | Seminole Community College | |